Gene : Eucgr.A02100 E. grandis v2.0
Defline:  (1 of 1) PTHR22904:SF373 - PROTEIN TIC 40, CHLOROPLASTIC Genomic Order:  1886
Name:  ? Eucgr.A02100 Secondary Identifier:  ? PAC:32048811
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02100 0.5kb upstream 0.5kb upstream 8342 true Chr01: 36429604-36437945 Eucalyptus grandis
Eucgr.A02100 0.5kb upstream 0.5kb upstream 500 false Chr01: 36429604-36430103 Eucalyptus grandis
Eucgr.A02100 0.5kb downstream 0.5kb downstream 8342 true Chr01: 36430104-36438445 Eucalyptus grandis
Eucgr.A02100 0.5kb downstream 0.5kb downstream 500 false Chr01: 36437946-36438445 Eucalyptus grandis
Eucgr.A02100 1.0kb upstream 1.0kb upstream 8842 true Chr01: 36429104-36437945 Eucalyptus grandis
Eucgr.A02100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36429104-36430103 Eucalyptus grandis
Eucgr.A02100 1.0kb downstream 1.0kb downstream 8842 true Chr01: 36430104-36438945 Eucalyptus grandis
Eucgr.A02100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36437946-36438945 Eucalyptus grandis
Eucgr.A02100 2.0kb upstream 2.0kb upstream 9842 true Chr01: 36428104-36437945 Eucalyptus grandis
Eucgr.A02100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36428104-36430103 Eucalyptus grandis
Eucgr.A02100 2.0kb downstream 2.0kb downstream 9842 true Chr01: 36430104-36439945 Eucalyptus grandis
Eucgr.A02100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36437946-36439945 Eucalyptus grandis
Eucgr.A02100 5.0kb upstream 5.0kb upstream 12842 true Chr01: 36425104-36437945 Eucalyptus grandis
Eucgr.A02100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36425104-36430103 Eucalyptus grandis
Eucgr.A02100 5.0kb downstream 5.0kb downstream 12842 true Chr01: 36430104-36442945 Eucalyptus grandis
Eucgr.A02100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36437946-36442945 Eucalyptus grandis
Eucgr.A02100 10.0kb upstream 10.0kb upstream 17842 true Chr01: 36420104-36437945 Eucalyptus grandis
Eucgr.A02100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36420104-36430103 Eucalyptus grandis
Eucgr.A02100 10.0kb downstream 10.0kb downstream 17842 true Chr01: 36430104-36447945 Eucalyptus grandis
Eucgr.A02100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36437946-36447945 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060602 5270 Rosid View MSA
123738700 5271 Pentapetalae View MSA
122785851 5272 Eudicot View MSA
122043574 5273 Angiosperm View MSA
121344558 5274 Embryophyte View MSA
123424576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.3759 0.0 54.3291    
cufflinks 13.7831 0.0 31.6013    
cufflinks 22.5463 0.0 50.3806    
cufflinks 10.368 0.0 24.3388   Low
cufflinks 17.1664 0.0 38.8591    
cufflinks 37.4878 0.0 82.9387 High High

0 Strain