Gene : Eucgr.A02043 E. grandis v2.0
Defline:  (1 of 2) PTHR12565:SF86 - TRANSCRIPTION FACTOR PIF4-RELATED Genomic Order:  1837
Name:  ? Eucgr.A02043 Secondary Identifier:  ? PAC:32047754
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02043 0.5kb upstream 0.5kb upstream 5219 true Chr01: 35862052-35867270 Eucalyptus grandis
Eucgr.A02043 0.5kb upstream 0.5kb upstream 500 false Chr01: 35862052-35862551 Eucalyptus grandis
Eucgr.A02043 0.5kb downstream 0.5kb downstream 5219 true Chr01: 35862552-35867770 Eucalyptus grandis
Eucgr.A02043 0.5kb downstream 0.5kb downstream 500 false Chr01: 35867271-35867770 Eucalyptus grandis
Eucgr.A02043 1.0kb upstream 1.0kb upstream 5719 true Chr01: 35861552-35867270 Eucalyptus grandis
Eucgr.A02043 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35861552-35862551 Eucalyptus grandis
Eucgr.A02043 1.0kb downstream 1.0kb downstream 5719 true Chr01: 35862552-35868270 Eucalyptus grandis
Eucgr.A02043 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35867271-35868270 Eucalyptus grandis
Eucgr.A02043 2.0kb upstream 2.0kb upstream 6719 true Chr01: 35860552-35867270 Eucalyptus grandis
Eucgr.A02043 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35860552-35862551 Eucalyptus grandis
Eucgr.A02043 2.0kb downstream 2.0kb downstream 6719 true Chr01: 35862552-35869270 Eucalyptus grandis
Eucgr.A02043 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35867271-35869270 Eucalyptus grandis
Eucgr.A02043 5.0kb upstream 5.0kb upstream 9719 true Chr01: 35857552-35867270 Eucalyptus grandis
Eucgr.A02043 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35857552-35862551 Eucalyptus grandis
Eucgr.A02043 5.0kb downstream 5.0kb downstream 9719 true Chr01: 35862552-35872270 Eucalyptus grandis
Eucgr.A02043 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35867271-35872270 Eucalyptus grandis
Eucgr.A02043 10.0kb upstream 10.0kb upstream 14719 true Chr01: 35852552-35867270 Eucalyptus grandis
Eucgr.A02043 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35852552-35862551 Eucalyptus grandis
Eucgr.A02043 10.0kb downstream 10.0kb downstream 14719 true Chr01: 35862552-35877270 Eucalyptus grandis
Eucgr.A02043 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35867271-35877270 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069526 5270 Rosid View MSA
123737897 5271 Pentapetalae View MSA
122794460 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.2651 0.0 110.134 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 27.9654 0.0 75.9505 High  
cufflinks 0.256758 0.0 1.00367 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 47.0977 0.0 133.202 High  

0 Strain