Gene : Eucgr.A02011 E. grandis v2.0
Defline:  (1 of 5) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  1806
Name:  ? Eucgr.A02011 Secondary Identifier:  ? PAC:32048869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02011 0.5kb upstream 0.5kb upstream 6948 true Chr01: 35562825-35569772 Eucalyptus grandis
Eucgr.A02011 0.5kb upstream 0.5kb upstream 500 false Chr01: 35569273-35569772 Eucalyptus grandis
Eucgr.A02011 0.5kb downstream 0.5kb downstream 6948 true Chr01: 35562325-35569272 Eucalyptus grandis
Eucgr.A02011 0.5kb downstream 0.5kb downstream 500 false Chr01: 35562325-35562824 Eucalyptus grandis
Eucgr.A02011 1.0kb upstream 1.0kb upstream 7448 true Chr01: 35562825-35570272 Eucalyptus grandis
Eucgr.A02011 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35569273-35570272 Eucalyptus grandis
Eucgr.A02011 1.0kb downstream 1.0kb downstream 7448 true Chr01: 35561825-35569272 Eucalyptus grandis
Eucgr.A02011 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35561825-35562824 Eucalyptus grandis
Eucgr.A02011 2.0kb upstream 2.0kb upstream 8448 true Chr01: 35562825-35571272 Eucalyptus grandis
Eucgr.A02011 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35569273-35571272 Eucalyptus grandis
Eucgr.A02011 2.0kb downstream 2.0kb downstream 8448 true Chr01: 35560825-35569272 Eucalyptus grandis
Eucgr.A02011 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35560825-35562824 Eucalyptus grandis
Eucgr.A02011 5.0kb upstream 5.0kb upstream 11448 true Chr01: 35562825-35574272 Eucalyptus grandis
Eucgr.A02011 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35569273-35574272 Eucalyptus grandis
Eucgr.A02011 5.0kb downstream 5.0kb downstream 11448 true Chr01: 35557825-35569272 Eucalyptus grandis
Eucgr.A02011 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35557825-35562824 Eucalyptus grandis
Eucgr.A02011 10.0kb upstream 10.0kb upstream 16448 true Chr01: 35562825-35579272 Eucalyptus grandis
Eucgr.A02011 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35569273-35579272 Eucalyptus grandis
Eucgr.A02011 10.0kb downstream 10.0kb downstream 16448 true Chr01: 35552825-35569272 Eucalyptus grandis
Eucgr.A02011 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35552825-35562824 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063626 5270 Rosid View MSA
123737447 5271 Pentapetalae View MSA
122788593 5272 Eudicot View MSA
122046976 5273 Angiosperm View MSA
121346361 5274 Embryophyte View MSA
123380372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.82713 0.0 23.9646    
cufflinks 3.96323 0.0 10.041   Low
cufflinks 13.5635 0.0 38.1011    
cufflinks 5.65643 0.0 16.5527    
cufflinks 15.1506 0.0 40.4984    
cufflinks 15.7118 0.0 42.2066    

0 Strain