Gene : Eucgr.A01979 E. grandis v2.0
Defline:  (1 of 2) PTHR32227:SF127 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  1781
Name:  ? Eucgr.A01979 Secondary Identifier:  ? PAC:32047193
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01979 0.5kb upstream 0.5kb upstream 3692 true Chr01: 35170672-35174363 Eucalyptus grandis
Eucgr.A01979 0.5kb upstream 0.5kb upstream 500 false Chr01: 35173864-35174363 Eucalyptus grandis
Eucgr.A01979 0.5kb downstream 0.5kb downstream 3692 true Chr01: 35170172-35173863 Eucalyptus grandis
Eucgr.A01979 0.5kb downstream 0.5kb downstream 500 false Chr01: 35170172-35170671 Eucalyptus grandis
Eucgr.A01979 1.0kb upstream 1.0kb upstream 4192 true Chr01: 35170672-35174863 Eucalyptus grandis
Eucgr.A01979 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35173864-35174863 Eucalyptus grandis
Eucgr.A01979 1.0kb downstream 1.0kb downstream 4192 true Chr01: 35169672-35173863 Eucalyptus grandis
Eucgr.A01979 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35169672-35170671 Eucalyptus grandis
Eucgr.A01979 2.0kb upstream 2.0kb upstream 5192 true Chr01: 35170672-35175863 Eucalyptus grandis
Eucgr.A01979 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35173864-35175863 Eucalyptus grandis
Eucgr.A01979 2.0kb downstream 2.0kb downstream 5192 true Chr01: 35168672-35173863 Eucalyptus grandis
Eucgr.A01979 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35168672-35170671 Eucalyptus grandis
Eucgr.A01979 5.0kb upstream 5.0kb upstream 8192 true Chr01: 35170672-35178863 Eucalyptus grandis
Eucgr.A01979 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35173864-35178863 Eucalyptus grandis
Eucgr.A01979 5.0kb downstream 5.0kb downstream 8192 true Chr01: 35165672-35173863 Eucalyptus grandis
Eucgr.A01979 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35165672-35170671 Eucalyptus grandis
Eucgr.A01979 10.0kb upstream 10.0kb upstream 13192 true Chr01: 35170672-35183863 Eucalyptus grandis
Eucgr.A01979 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35173864-35183863 Eucalyptus grandis
Eucgr.A01979 10.0kb downstream 10.0kb downstream 13192 true Chr01: 35160672-35173863 Eucalyptus grandis
Eucgr.A01979 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35160672-35170671 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061079 5270 Rosid View MSA
123753343 5271 Pentapetalae View MSA
122794093 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.70097 0.0 4.72811    
cufflinks 4.12478 0.0 10.4727    
cufflinks 1.474 0.0 4.16769    
cufflinks 12.8104 0.0 29.3596    
cufflinks 23.232 0.0 51.624   High
cufflinks 0.461686 0.0 1.48481 Low Low

0 Strain