Gene : Eucgr.A01954 E. grandis v2.0
Defline:  (1 of 2) PTHR11671 - ATP SYNTHASE SUBUNIT D Genomic Order:  1758
Name:  ? Eucgr.A01954 Secondary Identifier:  ? PAC:32047469
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01954 0.5kb upstream 0.5kb upstream 2877 true Chr01: 34933028-34935904 Eucalyptus grandis
Eucgr.A01954 0.5kb upstream 0.5kb upstream 500 false Chr01: 34935405-34935904 Eucalyptus grandis
Eucgr.A01954 0.5kb downstream 0.5kb downstream 2877 true Chr01: 34932528-34935404 Eucalyptus grandis
Eucgr.A01954 0.5kb downstream 0.5kb downstream 500 false Chr01: 34932528-34933027 Eucalyptus grandis
Eucgr.A01954 1.0kb upstream 1.0kb upstream 3377 true Chr01: 34933028-34936404 Eucalyptus grandis
Eucgr.A01954 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34935405-34936404 Eucalyptus grandis
Eucgr.A01954 1.0kb downstream 1.0kb downstream 3377 true Chr01: 34932028-34935404 Eucalyptus grandis
Eucgr.A01954 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34932028-34933027 Eucalyptus grandis
Eucgr.A01954 2.0kb upstream 2.0kb upstream 4377 true Chr01: 34933028-34937404 Eucalyptus grandis
Eucgr.A01954 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34935405-34937404 Eucalyptus grandis
Eucgr.A01954 2.0kb downstream 2.0kb downstream 4377 true Chr01: 34931028-34935404 Eucalyptus grandis
Eucgr.A01954 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34931028-34933027 Eucalyptus grandis
Eucgr.A01954 5.0kb upstream 5.0kb upstream 7377 true Chr01: 34933028-34940404 Eucalyptus grandis
Eucgr.A01954 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34935405-34940404 Eucalyptus grandis
Eucgr.A01954 5.0kb downstream 5.0kb downstream 7377 true Chr01: 34928028-34935404 Eucalyptus grandis
Eucgr.A01954 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34928028-34933027 Eucalyptus grandis
Eucgr.A01954 10.0kb upstream 10.0kb upstream 12377 true Chr01: 34933028-34945404 Eucalyptus grandis
Eucgr.A01954 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34935405-34945404 Eucalyptus grandis
Eucgr.A01954 10.0kb downstream 10.0kb downstream 12377 true Chr01: 34923028-34935404 Eucalyptus grandis
Eucgr.A01954 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34923028-34933027 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068581 5270 Rosid View MSA
123747153 5271 Pentapetalae View MSA
122793395 5272 Eudicot View MSA
122045398 5273 Angiosperm View MSA
121346383 5274 Embryophyte View MSA
123424080 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.411 0.0 31.7376    
cufflinks 36.5042 0.0 81.1594    
cufflinks 12.3888 0.0 29.5449    
cufflinks 54.2839 0.0 120.052 High High
cufflinks 41.4972 0.0 92.0565 High  
cufflinks 10.5693 0.0 25.6386   Low

0 Strain