Gene : Eucgr.A01823 E. grandis v2.0
Defline:  (1 of 2) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  1643
Name:  ? Eucgr.A01823 Secondary Identifier:  ? PAC:32048725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01823 0.5kb upstream 0.5kb upstream 4781 true Chr01: 33196272-33201052 Eucalyptus grandis
Eucgr.A01823 0.5kb upstream 0.5kb upstream 500 false Chr01: 33200553-33201052 Eucalyptus grandis
Eucgr.A01823 0.5kb downstream 0.5kb downstream 4781 true Chr01: 33195772-33200552 Eucalyptus grandis
Eucgr.A01823 0.5kb downstream 0.5kb downstream 500 false Chr01: 33195772-33196271 Eucalyptus grandis
Eucgr.A01823 1.0kb upstream 1.0kb upstream 5281 true Chr01: 33196272-33201552 Eucalyptus grandis
Eucgr.A01823 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33200553-33201552 Eucalyptus grandis
Eucgr.A01823 1.0kb downstream 1.0kb downstream 5281 true Chr01: 33195272-33200552 Eucalyptus grandis
Eucgr.A01823 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33195272-33196271 Eucalyptus grandis
Eucgr.A01823 2.0kb upstream 2.0kb upstream 6281 true Chr01: 33196272-33202552 Eucalyptus grandis
Eucgr.A01823 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33200553-33202552 Eucalyptus grandis
Eucgr.A01823 2.0kb downstream 2.0kb downstream 6281 true Chr01: 33194272-33200552 Eucalyptus grandis
Eucgr.A01823 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33194272-33196271 Eucalyptus grandis
Eucgr.A01823 5.0kb upstream 5.0kb upstream 9281 true Chr01: 33196272-33205552 Eucalyptus grandis
Eucgr.A01823 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33200553-33205552 Eucalyptus grandis
Eucgr.A01823 5.0kb downstream 5.0kb downstream 9281 true Chr01: 33191272-33200552 Eucalyptus grandis
Eucgr.A01823 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33191272-33196271 Eucalyptus grandis
Eucgr.A01823 10.0kb upstream 10.0kb upstream 14281 true Chr01: 33196272-33210552 Eucalyptus grandis
Eucgr.A01823 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33200553-33210552 Eucalyptus grandis
Eucgr.A01823 10.0kb downstream 10.0kb downstream 14281 true Chr01: 33186272-33200552 Eucalyptus grandis
Eucgr.A01823 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33186272-33196271 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0912 0.0 29.273    
cufflinks 168.079 0.0 421.75 High High
cufflinks 13.9923 0.0 31.1712    
cufflinks 138.867 0.0 341.246 High High
cufflinks 45.0965 0.0 101.158 High  
cufflinks 17.3685 0.0 38.5715    

0 Strain