Gene : Eucgr.A01754 E. grandis v2.0
Defline:  (1 of 1) PTHR23240//PTHR23240:SF9 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED Genomic Order:  1579
Name:  ? Eucgr.A01754 Secondary Identifier:  ? PAC:32048821
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01754 0.5kb upstream 0.5kb upstream 11675 true Chr01: 32456271-32467945 Eucalyptus grandis
Eucgr.A01754 0.5kb upstream 0.5kb upstream 500 false Chr01: 32456271-32456770 Eucalyptus grandis
Eucgr.A01754 0.5kb downstream 0.5kb downstream 11675 true Chr01: 32456771-32468445 Eucalyptus grandis
Eucgr.A01754 0.5kb downstream 0.5kb downstream 500 false Chr01: 32467946-32468445 Eucalyptus grandis
Eucgr.A01754 1.0kb upstream 1.0kb upstream 12175 true Chr01: 32455771-32467945 Eucalyptus grandis
Eucgr.A01754 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32455771-32456770 Eucalyptus grandis
Eucgr.A01754 1.0kb downstream 1.0kb downstream 12175 true Chr01: 32456771-32468945 Eucalyptus grandis
Eucgr.A01754 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32467946-32468945 Eucalyptus grandis
Eucgr.A01754 2.0kb upstream 2.0kb upstream 13175 true Chr01: 32454771-32467945 Eucalyptus grandis
Eucgr.A01754 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32454771-32456770 Eucalyptus grandis
Eucgr.A01754 2.0kb downstream 2.0kb downstream 13175 true Chr01: 32456771-32469945 Eucalyptus grandis
Eucgr.A01754 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32467946-32469945 Eucalyptus grandis
Eucgr.A01754 5.0kb upstream 5.0kb upstream 16175 true Chr01: 32451771-32467945 Eucalyptus grandis
Eucgr.A01754 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32451771-32456770 Eucalyptus grandis
Eucgr.A01754 5.0kb downstream 5.0kb downstream 16175 true Chr01: 32456771-32472945 Eucalyptus grandis
Eucgr.A01754 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32467946-32472945 Eucalyptus grandis
Eucgr.A01754 10.0kb upstream 10.0kb upstream 21175 true Chr01: 32446771-32467945 Eucalyptus grandis
Eucgr.A01754 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32446771-32456770 Eucalyptus grandis
Eucgr.A01754 10.0kb downstream 10.0kb downstream 21175 true Chr01: 32456771-32477945 Eucalyptus grandis
Eucgr.A01754 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32467946-32477945 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073622 5270 Rosid View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.500285 0.0 3.80093 Low  
cufflinks 0.95715 0.0 5.87701    
cufflinks 0.798172 0.0 5.98524    
cufflinks 0.296715 0.0 2.38963 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.62998 0.0 10.9045   High

0 Strain