Gene : Eucgr.A01757 E. grandis v2.0
Defline:  (1 of 32) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  1582
Name:  ? Eucgr.A01757 Secondary Identifier:  ? PAC:32047214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01757 0.5kb upstream 0.5kb upstream 9651 true Chr01: 32470036-32479686 Eucalyptus grandis
Eucgr.A01757 0.5kb upstream 0.5kb upstream 500 false Chr01: 32470036-32470535 Eucalyptus grandis
Eucgr.A01757 0.5kb downstream 0.5kb downstream 9651 true Chr01: 32470536-32480186 Eucalyptus grandis
Eucgr.A01757 0.5kb downstream 0.5kb downstream 500 false Chr01: 32479687-32480186 Eucalyptus grandis
Eucgr.A01757 1.0kb upstream 1.0kb upstream 10151 true Chr01: 32469536-32479686 Eucalyptus grandis
Eucgr.A01757 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32469536-32470535 Eucalyptus grandis
Eucgr.A01757 1.0kb downstream 1.0kb downstream 10151 true Chr01: 32470536-32480686 Eucalyptus grandis
Eucgr.A01757 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32479687-32480686 Eucalyptus grandis
Eucgr.A01757 2.0kb upstream 2.0kb upstream 11151 true Chr01: 32468536-32479686 Eucalyptus grandis
Eucgr.A01757 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32468536-32470535 Eucalyptus grandis
Eucgr.A01757 2.0kb downstream 2.0kb downstream 11151 true Chr01: 32470536-32481686 Eucalyptus grandis
Eucgr.A01757 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32479687-32481686 Eucalyptus grandis
Eucgr.A01757 5.0kb upstream 5.0kb upstream 14151 true Chr01: 32465536-32479686 Eucalyptus grandis
Eucgr.A01757 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32465536-32470535 Eucalyptus grandis
Eucgr.A01757 5.0kb downstream 5.0kb downstream 14151 true Chr01: 32470536-32484686 Eucalyptus grandis
Eucgr.A01757 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32479687-32484686 Eucalyptus grandis
Eucgr.A01757 10.0kb upstream 10.0kb upstream 19151 true Chr01: 32460536-32479686 Eucalyptus grandis
Eucgr.A01757 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32460536-32470535 Eucalyptus grandis
Eucgr.A01757 10.0kb downstream 10.0kb downstream 19151 true Chr01: 32470536-32489686 Eucalyptus grandis
Eucgr.A01757 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32479687-32489686 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.88682 0.0 14.1136   Low
cufflinks 16.442 0.0 37.0439    
cufflinks 16.4733 0.0 37.0945    
cufflinks 9.71329 0.0 21.9501    
cufflinks 10.7629 0.0 24.3043    
cufflinks 13.4776 0.0 35.3627    

0 Strain