Gene : Eucgr.A02441 E. grandis v2.0
Defline:  (1 of 16) PF03110 - SBP domain (SBP) Genomic Order:  2193
Name:  ? Eucgr.A02441 Secondary Identifier:  ? PAC:32046838
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02441 0.5kb upstream 0.5kb upstream 5774 true Chr01: 39752248-39758021 Eucalyptus grandis
Eucgr.A02441 0.5kb upstream 0.5kb upstream 500 false Chr01: 39757522-39758021 Eucalyptus grandis
Eucgr.A02441 0.5kb downstream 0.5kb downstream 5774 true Chr01: 39751748-39757521 Eucalyptus grandis
Eucgr.A02441 0.5kb downstream 0.5kb downstream 500 false Chr01: 39751748-39752247 Eucalyptus grandis
Eucgr.A02441 1.0kb upstream 1.0kb upstream 6274 true Chr01: 39752248-39758521 Eucalyptus grandis
Eucgr.A02441 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39757522-39758521 Eucalyptus grandis
Eucgr.A02441 1.0kb downstream 1.0kb downstream 6274 true Chr01: 39751248-39757521 Eucalyptus grandis
Eucgr.A02441 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39751248-39752247 Eucalyptus grandis
Eucgr.A02441 2.0kb upstream 2.0kb upstream 7274 true Chr01: 39752248-39759521 Eucalyptus grandis
Eucgr.A02441 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39757522-39759521 Eucalyptus grandis
Eucgr.A02441 2.0kb downstream 2.0kb downstream 7274 true Chr01: 39750248-39757521 Eucalyptus grandis
Eucgr.A02441 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39750248-39752247 Eucalyptus grandis
Eucgr.A02441 5.0kb upstream 5.0kb upstream 10274 true Chr01: 39752248-39762521 Eucalyptus grandis
Eucgr.A02441 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39757522-39762521 Eucalyptus grandis
Eucgr.A02441 5.0kb downstream 5.0kb downstream 10274 true Chr01: 39747248-39757521 Eucalyptus grandis
Eucgr.A02441 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39747248-39752247 Eucalyptus grandis
Eucgr.A02441 10.0kb upstream 10.0kb upstream 15274 true Chr01: 39752248-39767521 Eucalyptus grandis
Eucgr.A02441 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39757522-39767521 Eucalyptus grandis
Eucgr.A02441 10.0kb downstream 10.0kb downstream 15274 true Chr01: 39742248-39757521 Eucalyptus grandis
Eucgr.A02441 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39742248-39752247 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062947 5270 Rosid View MSA
123736382 5271 Pentapetalae View MSA
122786018 5272 Eudicot View MSA
122041751 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309885 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3205 0.0 32.3169    
cufflinks 8.04458 0.0 19.176    
cufflinks 30.8807 0.0 69.3651 High High
cufflinks 10.6627 0.0 24.8741    
cufflinks 21.0734 0.0 48.2162    
cufflinks 1.77186 0.0 5.12943   Low

0 Strain