Gene : Eucgr.A02425 E. grandis v2.0
Defline:  (1 of 7) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  2179
Name:  ? Eucgr.A02425 Secondary Identifier:  ? PAC:32048657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02425 0.5kb upstream 0.5kb upstream 8373 true Chr01: 39587506-39595878 Eucalyptus grandis
Eucgr.A02425 0.5kb upstream 0.5kb upstream 500 false Chr01: 39595379-39595878 Eucalyptus grandis
Eucgr.A02425 0.5kb downstream 0.5kb downstream 8373 true Chr01: 39587006-39595378 Eucalyptus grandis
Eucgr.A02425 0.5kb downstream 0.5kb downstream 500 false Chr01: 39587006-39587505 Eucalyptus grandis
Eucgr.A02425 1.0kb upstream 1.0kb upstream 8873 true Chr01: 39587506-39596378 Eucalyptus grandis
Eucgr.A02425 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39595379-39596378 Eucalyptus grandis
Eucgr.A02425 1.0kb downstream 1.0kb downstream 8873 true Chr01: 39586506-39595378 Eucalyptus grandis
Eucgr.A02425 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39586506-39587505 Eucalyptus grandis
Eucgr.A02425 2.0kb upstream 2.0kb upstream 9873 true Chr01: 39587506-39597378 Eucalyptus grandis
Eucgr.A02425 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39595379-39597378 Eucalyptus grandis
Eucgr.A02425 2.0kb downstream 2.0kb downstream 9873 true Chr01: 39585506-39595378 Eucalyptus grandis
Eucgr.A02425 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39585506-39587505 Eucalyptus grandis
Eucgr.A02425 5.0kb upstream 5.0kb upstream 12873 true Chr01: 39587506-39600378 Eucalyptus grandis
Eucgr.A02425 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39595379-39600378 Eucalyptus grandis
Eucgr.A02425 5.0kb downstream 5.0kb downstream 12873 true Chr01: 39582506-39595378 Eucalyptus grandis
Eucgr.A02425 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39582506-39587505 Eucalyptus grandis
Eucgr.A02425 10.0kb upstream 10.0kb upstream 17873 true Chr01: 39587506-39605378 Eucalyptus grandis
Eucgr.A02425 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39595379-39605378 Eucalyptus grandis
Eucgr.A02425 10.0kb downstream 10.0kb downstream 17873 true Chr01: 39577506-39595378 Eucalyptus grandis
Eucgr.A02425 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39577506-39587505 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.591017 0.0 1.79153    
cufflinks 0.851722 0.0 2.47039 Low  
cufflinks 0.322442 0.0 1.04821 Low  
cufflinks 1.5231 0.0 4.14121    
cufflinks 0.991723 0.0 2.83525    
cufflinks 0.00624569 0.0 0.0756407 Low Low

0 Strain