Gene : Eucgr.A02412 E. grandis v2.0
Defline:  (1 of 1) PF10183 - ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS) Genomic Order:  2166
Name:  ? Eucgr.A02412 Secondary Identifier:  ? PAC:32048376
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3781 Eucalyptus grandis pathologic  
Egrandis PWY-4302 Eucalyptus grandis pathologic  
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02412 0.5kb upstream 0.5kb upstream 4371 true Chr01: 39490916-39495286 Eucalyptus grandis
Eucgr.A02412 0.5kb upstream 0.5kb upstream 500 false Chr01: 39494787-39495286 Eucalyptus grandis
Eucgr.A02412 0.5kb downstream 0.5kb downstream 4371 true Chr01: 39490416-39494786 Eucalyptus grandis
Eucgr.A02412 0.5kb downstream 0.5kb downstream 500 false Chr01: 39490416-39490915 Eucalyptus grandis
Eucgr.A02412 1.0kb upstream 1.0kb upstream 4871 true Chr01: 39490916-39495786 Eucalyptus grandis
Eucgr.A02412 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39494787-39495786 Eucalyptus grandis
Eucgr.A02412 1.0kb downstream 1.0kb downstream 4871 true Chr01: 39489916-39494786 Eucalyptus grandis
Eucgr.A02412 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39489916-39490915 Eucalyptus grandis
Eucgr.A02412 2.0kb upstream 2.0kb upstream 5871 true Chr01: 39490916-39496786 Eucalyptus grandis
Eucgr.A02412 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39494787-39496786 Eucalyptus grandis
Eucgr.A02412 2.0kb downstream 2.0kb downstream 5871 true Chr01: 39488916-39494786 Eucalyptus grandis
Eucgr.A02412 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39488916-39490915 Eucalyptus grandis
Eucgr.A02412 5.0kb upstream 5.0kb upstream 8871 true Chr01: 39490916-39499786 Eucalyptus grandis
Eucgr.A02412 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39494787-39499786 Eucalyptus grandis
Eucgr.A02412 5.0kb downstream 5.0kb downstream 8871 true Chr01: 39485916-39494786 Eucalyptus grandis
Eucgr.A02412 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39485916-39490915 Eucalyptus grandis
Eucgr.A02412 10.0kb upstream 10.0kb upstream 13871 true Chr01: 39490916-39504786 Eucalyptus grandis
Eucgr.A02412 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39494787-39504786 Eucalyptus grandis
Eucgr.A02412 10.0kb downstream 10.0kb downstream 13871 true Chr01: 39480916-39494786 Eucalyptus grandis
Eucgr.A02412 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39480916-39490915 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027491 5273 Angiosperm View MSA
124074788 5270 Rosid View MSA
123753025 5271 Pentapetalae View MSA
122794671 5272 Eudicot View MSA
121352423 5274 Embryophyte View MSA
123382766 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.15459 0.0 7.86241    
cufflinks 2.50143 0.0 6.35108   Low
cufflinks 2.78008 0.0 6.99858    
cufflinks 3.60288 0.0 8.79364   High
cufflinks 3.33684 0.0 8.25155    
cufflinks 2.69871 0.0 6.84635    

0 Strain