Gene : Eucgr.A02344 E. grandis v2.0
Defline:  (1 of 4) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  2101
Name:  ? Eucgr.A02344 Secondary Identifier:  ? PAC:32047442
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02344 0.5kb upstream 0.5kb upstream 11232 true Chr01: 38910036-38921267 Eucalyptus grandis
Eucgr.A02344 0.5kb upstream 0.5kb upstream 500 false Chr01: 38920768-38921267 Eucalyptus grandis
Eucgr.A02344 0.5kb downstream 0.5kb downstream 11232 true Chr01: 38909536-38920767 Eucalyptus grandis
Eucgr.A02344 0.5kb downstream 0.5kb downstream 500 false Chr01: 38909536-38910035 Eucalyptus grandis
Eucgr.A02344 1.0kb upstream 1.0kb upstream 11732 true Chr01: 38910036-38921767 Eucalyptus grandis
Eucgr.A02344 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38920768-38921767 Eucalyptus grandis
Eucgr.A02344 1.0kb downstream 1.0kb downstream 11732 true Chr01: 38909036-38920767 Eucalyptus grandis
Eucgr.A02344 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38909036-38910035 Eucalyptus grandis
Eucgr.A02344 2.0kb upstream 2.0kb upstream 12732 true Chr01: 38910036-38922767 Eucalyptus grandis
Eucgr.A02344 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38920768-38922767 Eucalyptus grandis
Eucgr.A02344 2.0kb downstream 2.0kb downstream 12732 true Chr01: 38908036-38920767 Eucalyptus grandis
Eucgr.A02344 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38908036-38910035 Eucalyptus grandis
Eucgr.A02344 5.0kb upstream 5.0kb upstream 15732 true Chr01: 38910036-38925767 Eucalyptus grandis
Eucgr.A02344 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38920768-38925767 Eucalyptus grandis
Eucgr.A02344 5.0kb downstream 5.0kb downstream 15732 true Chr01: 38905036-38920767 Eucalyptus grandis
Eucgr.A02344 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38905036-38910035 Eucalyptus grandis
Eucgr.A02344 10.0kb upstream 10.0kb upstream 20732 true Chr01: 38910036-38930767 Eucalyptus grandis
Eucgr.A02344 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38920768-38930767 Eucalyptus grandis
Eucgr.A02344 10.0kb downstream 10.0kb downstream 20732 true Chr01: 38900036-38920767 Eucalyptus grandis
Eucgr.A02344 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38900036-38910035 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5708 0.0 34.4616    
cufflinks 15.9865 0.0 35.4253    
cufflinks 14.8414 0.0 32.8498    
cufflinks 14.8645 0.0 32.9221    
cufflinks 15.7423 0.0 34.8632    
cufflinks 17.5025 0.0 38.7604   High

0 Strain