Gene : Eucgr.A02311 E. grandis v2.0
Defline:  (1 of 4) 1.1.1.8 - Glycerol-3-phosphate dehydrogenase (NAD(+)) / NADH-dihydroxyacetone phosphate reductase Genomic Order:  2074
Name:  ? Eucgr.A02311 Secondary Identifier:  ? PAC:32048974
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6118 Eucalyptus grandis pathologic  
Egrandis PWY-7411 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02311 0.5kb upstream 0.5kb upstream 3594 true Chr01: 38547006-38550599 Eucalyptus grandis
Eucgr.A02311 0.5kb upstream 0.5kb upstream 500 false Chr01: 38547006-38547505 Eucalyptus grandis
Eucgr.A02311 0.5kb downstream 0.5kb downstream 3594 true Chr01: 38547506-38551099 Eucalyptus grandis
Eucgr.A02311 0.5kb downstream 0.5kb downstream 500 false Chr01: 38550600-38551099 Eucalyptus grandis
Eucgr.A02311 1.0kb upstream 1.0kb upstream 4094 true Chr01: 38546506-38550599 Eucalyptus grandis
Eucgr.A02311 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38546506-38547505 Eucalyptus grandis
Eucgr.A02311 1.0kb downstream 1.0kb downstream 4094 true Chr01: 38547506-38551599 Eucalyptus grandis
Eucgr.A02311 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38550600-38551599 Eucalyptus grandis
Eucgr.A02311 2.0kb upstream 2.0kb upstream 5094 true Chr01: 38545506-38550599 Eucalyptus grandis
Eucgr.A02311 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38545506-38547505 Eucalyptus grandis
Eucgr.A02311 2.0kb downstream 2.0kb downstream 5094 true Chr01: 38547506-38552599 Eucalyptus grandis
Eucgr.A02311 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38550600-38552599 Eucalyptus grandis
Eucgr.A02311 5.0kb upstream 5.0kb upstream 8094 true Chr01: 38542506-38550599 Eucalyptus grandis
Eucgr.A02311 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38542506-38547505 Eucalyptus grandis
Eucgr.A02311 5.0kb downstream 5.0kb downstream 8094 true Chr01: 38547506-38555599 Eucalyptus grandis
Eucgr.A02311 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38550600-38555599 Eucalyptus grandis
Eucgr.A02311 10.0kb upstream 10.0kb upstream 13094 true Chr01: 38537506-38550599 Eucalyptus grandis
Eucgr.A02311 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38537506-38547505 Eucalyptus grandis
Eucgr.A02311 10.0kb downstream 10.0kb downstream 13094 true Chr01: 38547506-38560599 Eucalyptus grandis
Eucgr.A02311 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38550600-38560599 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.7162 0.0 65.6911 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 29.5621 0.0 67.878 High  
cufflinks 0.0795913 0.0 0.443638 Low Low
cufflinks 0.366941 0.0 1.34865 Low  
cufflinks 18.2397 0.0 41.1822    

0 Strain