Gene : Eucgr.A02261 E. grandis v2.0
Defline:  (1 of 2) 4.4.1.8 - Cystathionine beta-lyase / Cystine lyase Genomic Order:  2030
Name:  ? Eucgr.A02261 Secondary Identifier:  ? PAC:32046862
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6936 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02261 0.5kb upstream 0.5kb upstream 5774 true Chr01: 38017459-38023232 Eucalyptus grandis
Eucgr.A02261 0.5kb upstream 0.5kb upstream 500 false Chr01: 38022733-38023232 Eucalyptus grandis
Eucgr.A02261 0.5kb downstream 0.5kb downstream 5774 true Chr01: 38016959-38022732 Eucalyptus grandis
Eucgr.A02261 0.5kb downstream 0.5kb downstream 500 false Chr01: 38016959-38017458 Eucalyptus grandis
Eucgr.A02261 1.0kb upstream 1.0kb upstream 6274 true Chr01: 38017459-38023732 Eucalyptus grandis
Eucgr.A02261 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38022733-38023732 Eucalyptus grandis
Eucgr.A02261 1.0kb downstream 1.0kb downstream 6274 true Chr01: 38016459-38022732 Eucalyptus grandis
Eucgr.A02261 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38016459-38017458 Eucalyptus grandis
Eucgr.A02261 2.0kb upstream 2.0kb upstream 7274 true Chr01: 38017459-38024732 Eucalyptus grandis
Eucgr.A02261 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38022733-38024732 Eucalyptus grandis
Eucgr.A02261 2.0kb downstream 2.0kb downstream 7274 true Chr01: 38015459-38022732 Eucalyptus grandis
Eucgr.A02261 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38015459-38017458 Eucalyptus grandis
Eucgr.A02261 5.0kb upstream 5.0kb upstream 10274 true Chr01: 38017459-38027732 Eucalyptus grandis
Eucgr.A02261 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38022733-38027732 Eucalyptus grandis
Eucgr.A02261 5.0kb downstream 5.0kb downstream 10274 true Chr01: 38012459-38022732 Eucalyptus grandis
Eucgr.A02261 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38012459-38017458 Eucalyptus grandis
Eucgr.A02261 10.0kb upstream 10.0kb upstream 15274 true Chr01: 38017459-38032732 Eucalyptus grandis
Eucgr.A02261 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38022733-38032732 Eucalyptus grandis
Eucgr.A02261 10.0kb downstream 10.0kb downstream 15274 true Chr01: 38007459-38022732 Eucalyptus grandis
Eucgr.A02261 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38007459-38017458 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
124062752 5270 Rosid View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.3189 0.0 52.5847    
cufflinks 29.5301 0.0 66.686    
cufflinks 21.5271 0.0 58.8036   Low
cufflinks 25.365 0.0 65.669    
cufflinks 25.1864 0.0 63.3953    
cufflinks 32.3331 0.0 85.6   High

0 Strain