Gene : Eucgr.A02167 E. grandis v2.0
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  1947
Name:  ? Eucgr.A02167 Secondary Identifier:  ? PAC:32046788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02167 0.5kb upstream 0.5kb upstream 5921 true Chr01: 37018886-37024806 Eucalyptus grandis
Eucgr.A02167 0.5kb upstream 0.5kb upstream 500 false Chr01: 37018886-37019385 Eucalyptus grandis
Eucgr.A02167 0.5kb downstream 0.5kb downstream 5921 true Chr01: 37019386-37025306 Eucalyptus grandis
Eucgr.A02167 0.5kb downstream 0.5kb downstream 500 false Chr01: 37024807-37025306 Eucalyptus grandis
Eucgr.A02167 1.0kb upstream 1.0kb upstream 6421 true Chr01: 37018386-37024806 Eucalyptus grandis
Eucgr.A02167 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37018386-37019385 Eucalyptus grandis
Eucgr.A02167 1.0kb downstream 1.0kb downstream 6421 true Chr01: 37019386-37025806 Eucalyptus grandis
Eucgr.A02167 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37024807-37025806 Eucalyptus grandis
Eucgr.A02167 2.0kb upstream 2.0kb upstream 7421 true Chr01: 37017386-37024806 Eucalyptus grandis
Eucgr.A02167 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37017386-37019385 Eucalyptus grandis
Eucgr.A02167 2.0kb downstream 2.0kb downstream 7421 true Chr01: 37019386-37026806 Eucalyptus grandis
Eucgr.A02167 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37024807-37026806 Eucalyptus grandis
Eucgr.A02167 5.0kb upstream 5.0kb upstream 10421 true Chr01: 37014386-37024806 Eucalyptus grandis
Eucgr.A02167 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37014386-37019385 Eucalyptus grandis
Eucgr.A02167 5.0kb downstream 5.0kb downstream 10421 true Chr01: 37019386-37029806 Eucalyptus grandis
Eucgr.A02167 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37024807-37029806 Eucalyptus grandis
Eucgr.A02167 10.0kb upstream 10.0kb upstream 15421 true Chr01: 37009386-37024806 Eucalyptus grandis
Eucgr.A02167 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37009386-37019385 Eucalyptus grandis
Eucgr.A02167 10.0kb downstream 10.0kb downstream 15421 true Chr01: 37019386-37034806 Eucalyptus grandis
Eucgr.A02167 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37024807-37034806 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071732 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.31042 0.0 3.912    
cufflinks 0.494791 0.0 1.67505 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain