Gene : Eucgr.A02812 E. grandis v2.0
Defline:  (1 of 1) 1.17.1.8 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase Genomic Order:  2527
Name:  ? Eucgr.A02812 Secondary Identifier:  ? PAC:32046099
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5097 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02812 0.5kb upstream 0.5kb upstream 3296 true Chr01: 43263774-43267069 Eucalyptus grandis
Eucgr.A02812 0.5kb upstream 0.5kb upstream 500 false Chr01: 43266570-43267069 Eucalyptus grandis
Eucgr.A02812 0.5kb downstream 0.5kb downstream 3296 true Chr01: 43263274-43266569 Eucalyptus grandis
Eucgr.A02812 0.5kb downstream 0.5kb downstream 500 false Chr01: 43263274-43263773 Eucalyptus grandis
Eucgr.A02812 1.0kb upstream 1.0kb upstream 3796 true Chr01: 43263774-43267569 Eucalyptus grandis
Eucgr.A02812 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43266570-43267569 Eucalyptus grandis
Eucgr.A02812 1.0kb downstream 1.0kb downstream 3796 true Chr01: 43262774-43266569 Eucalyptus grandis
Eucgr.A02812 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43262774-43263773 Eucalyptus grandis
Eucgr.A02812 2.0kb upstream 2.0kb upstream 4796 true Chr01: 43263774-43268569 Eucalyptus grandis
Eucgr.A02812 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43266570-43268569 Eucalyptus grandis
Eucgr.A02812 2.0kb downstream 2.0kb downstream 4796 true Chr01: 43261774-43266569 Eucalyptus grandis
Eucgr.A02812 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43261774-43263773 Eucalyptus grandis
Eucgr.A02812 5.0kb upstream 5.0kb upstream 7796 true Chr01: 43263774-43271569 Eucalyptus grandis
Eucgr.A02812 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43266570-43271569 Eucalyptus grandis
Eucgr.A02812 5.0kb downstream 5.0kb downstream 7796 true Chr01: 43258774-43266569 Eucalyptus grandis
Eucgr.A02812 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43258774-43263773 Eucalyptus grandis
Eucgr.A02812 10.0kb upstream 10.0kb upstream 12796 true Chr01: 43263774-43276569 Eucalyptus grandis
Eucgr.A02812 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43266570-43276569 Eucalyptus grandis
Eucgr.A02812 10.0kb downstream 10.0kb downstream 12796 true Chr01: 43253774-43266569 Eucalyptus grandis
Eucgr.A02812 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43253774-43263773 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065069 5270 Rosid View MSA
123739710 5271 Pentapetalae View MSA
122786759 5272 Eudicot View MSA
122042958 5273 Angiosperm View MSA
121344567 5274 Embryophyte View MSA
123380066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.11571 0.0 15.4305    
cufflinks 0.484204 0.0 1.884 Low  
cufflinks 2.4536 0.0 7.01707    
cufflinks 0.29573 0.0 1.25162 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 23.433 0.0 53.4139   High

0 Strain