Gene : Eucgr.A02770 E. grandis v2.0
Defline:  (1 of 3) PTHR10869:SF55 - OXOGLUTARATE/IRON-DEPENDENT OXYGENASE Genomic Order:  2487
Name:  ? Eucgr.A02770 Secondary Identifier:  ? PAC:32048279
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02770 0.5kb upstream 0.5kb upstream 4097 true Chr01: 42842837-42846933 Eucalyptus grandis
Eucgr.A02770 0.5kb upstream 0.5kb upstream 500 false Chr01: 42846434-42846933 Eucalyptus grandis
Eucgr.A02770 0.5kb downstream 0.5kb downstream 4097 true Chr01: 42842337-42846433 Eucalyptus grandis
Eucgr.A02770 0.5kb downstream 0.5kb downstream 500 false Chr01: 42842337-42842836 Eucalyptus grandis
Eucgr.A02770 1.0kb upstream 1.0kb upstream 4597 true Chr01: 42842837-42847433 Eucalyptus grandis
Eucgr.A02770 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42846434-42847433 Eucalyptus grandis
Eucgr.A02770 1.0kb downstream 1.0kb downstream 4597 true Chr01: 42841837-42846433 Eucalyptus grandis
Eucgr.A02770 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42841837-42842836 Eucalyptus grandis
Eucgr.A02770 2.0kb upstream 2.0kb upstream 5597 true Chr01: 42842837-42848433 Eucalyptus grandis
Eucgr.A02770 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42846434-42848433 Eucalyptus grandis
Eucgr.A02770 2.0kb downstream 2.0kb downstream 5597 true Chr01: 42840837-42846433 Eucalyptus grandis
Eucgr.A02770 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42840837-42842836 Eucalyptus grandis
Eucgr.A02770 5.0kb upstream 5.0kb upstream 8597 true Chr01: 42842837-42851433 Eucalyptus grandis
Eucgr.A02770 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42846434-42851433 Eucalyptus grandis
Eucgr.A02770 5.0kb downstream 5.0kb downstream 8597 true Chr01: 42837837-42846433 Eucalyptus grandis
Eucgr.A02770 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42837837-42842836 Eucalyptus grandis
Eucgr.A02770 10.0kb upstream 10.0kb upstream 13597 true Chr01: 42842837-42856433 Eucalyptus grandis
Eucgr.A02770 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42846434-42856433 Eucalyptus grandis
Eucgr.A02770 10.0kb downstream 10.0kb downstream 13597 true Chr01: 42832837-42846433 Eucalyptus grandis
Eucgr.A02770 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42832837-42842836 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791816 5273 Angiosperm View MSA
124066883 5270 Rosid View MSA
123739634 5271 Pentapetalae View MSA
122794132 5272 Eudicot View MSA
121063105 5274 Embryophyte View MSA
123102888 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.89099 0.0 12.3966    
cufflinks 6.63737 0.0 16.2329    
cufflinks 5.75571 0.0 14.3079    
cufflinks 26.8271 0.0 59.5784   High
cufflinks 24.2293 0.0 54.0074   High
cufflinks 9.55104 0.0 22.6213    

0 Strain