Gene : Eucgr.A02754 E. grandis v2.0
Defline:  (1 of 6) PTHR31636:SF4 - SCARECROW-LIKE PROTEIN 8 Genomic Order:  2471
Name:  ? Eucgr.A02754 Secondary Identifier:  ? PAC:32046635
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02754 0.5kb upstream 0.5kb upstream 2977 true Chr01: 42707250-42710226 Eucalyptus grandis
Eucgr.A02754 0.5kb upstream 0.5kb upstream 500 false Chr01: 42709727-42710226 Eucalyptus grandis
Eucgr.A02754 0.5kb downstream 0.5kb downstream 2977 true Chr01: 42706750-42709726 Eucalyptus grandis
Eucgr.A02754 0.5kb downstream 0.5kb downstream 500 false Chr01: 42706750-42707249 Eucalyptus grandis
Eucgr.A02754 1.0kb upstream 1.0kb upstream 3477 true Chr01: 42707250-42710726 Eucalyptus grandis
Eucgr.A02754 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42709727-42710726 Eucalyptus grandis
Eucgr.A02754 1.0kb downstream 1.0kb downstream 3477 true Chr01: 42706250-42709726 Eucalyptus grandis
Eucgr.A02754 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42706250-42707249 Eucalyptus grandis
Eucgr.A02754 2.0kb upstream 2.0kb upstream 4477 true Chr01: 42707250-42711726 Eucalyptus grandis
Eucgr.A02754 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42709727-42711726 Eucalyptus grandis
Eucgr.A02754 2.0kb downstream 2.0kb downstream 4477 true Chr01: 42705250-42709726 Eucalyptus grandis
Eucgr.A02754 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42705250-42707249 Eucalyptus grandis
Eucgr.A02754 5.0kb upstream 5.0kb upstream 7477 true Chr01: 42707250-42714726 Eucalyptus grandis
Eucgr.A02754 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42709727-42714726 Eucalyptus grandis
Eucgr.A02754 5.0kb downstream 5.0kb downstream 7477 true Chr01: 42702250-42709726 Eucalyptus grandis
Eucgr.A02754 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42702250-42707249 Eucalyptus grandis
Eucgr.A02754 10.0kb upstream 10.0kb upstream 12477 true Chr01: 42707250-42719726 Eucalyptus grandis
Eucgr.A02754 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42709727-42719726 Eucalyptus grandis
Eucgr.A02754 10.0kb downstream 10.0kb downstream 12477 true Chr01: 42697250-42709726 Eucalyptus grandis
Eucgr.A02754 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42697250-42707249 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062619 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.5284 0.0 83.6769 High  
cufflinks 135.096 0.0 326.646 High High
cufflinks 40.2562 0.0 89.7049 High  
cufflinks 95.4462 0.0 223.193 High  
cufflinks 116.263 0.0 277.944 High  
cufflinks 31.423 0.0 69.8991   Low

0 Strain