Gene : Eucgr.A02733 E. grandis v2.0
Defline:  (1 of 2) PTHR12802//PTHR12802:SF48 - SWI/SNF COMPLEX-RELATED Genomic Order:  2452
Name:  ? Eucgr.A02733 Secondary Identifier:  ? PAC:32046703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02733 0.5kb upstream 0.5kb upstream 4872 true Chr01: 42596988-42601859 Eucalyptus grandis
Eucgr.A02733 0.5kb upstream 0.5kb upstream 500 false Chr01: 42596988-42597487 Eucalyptus grandis
Eucgr.A02733 0.5kb downstream 0.5kb downstream 4872 true Chr01: 42597488-42602359 Eucalyptus grandis
Eucgr.A02733 0.5kb downstream 0.5kb downstream 500 false Chr01: 42601860-42602359 Eucalyptus grandis
Eucgr.A02733 1.0kb upstream 1.0kb upstream 5372 true Chr01: 42596488-42601859 Eucalyptus grandis
Eucgr.A02733 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42596488-42597487 Eucalyptus grandis
Eucgr.A02733 1.0kb downstream 1.0kb downstream 5372 true Chr01: 42597488-42602859 Eucalyptus grandis
Eucgr.A02733 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42601860-42602859 Eucalyptus grandis
Eucgr.A02733 2.0kb upstream 2.0kb upstream 6372 true Chr01: 42595488-42601859 Eucalyptus grandis
Eucgr.A02733 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42595488-42597487 Eucalyptus grandis
Eucgr.A02733 2.0kb downstream 2.0kb downstream 6372 true Chr01: 42597488-42603859 Eucalyptus grandis
Eucgr.A02733 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42601860-42603859 Eucalyptus grandis
Eucgr.A02733 5.0kb upstream 5.0kb upstream 9372 true Chr01: 42592488-42601859 Eucalyptus grandis
Eucgr.A02733 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42592488-42597487 Eucalyptus grandis
Eucgr.A02733 5.0kb downstream 5.0kb downstream 9372 true Chr01: 42597488-42606859 Eucalyptus grandis
Eucgr.A02733 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42601860-42606859 Eucalyptus grandis
Eucgr.A02733 10.0kb upstream 10.0kb upstream 14372 true Chr01: 42587488-42601859 Eucalyptus grandis
Eucgr.A02733 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42587488-42597487 Eucalyptus grandis
Eucgr.A02733 10.0kb downstream 10.0kb downstream 14372 true Chr01: 42597488-42611859 Eucalyptus grandis
Eucgr.A02733 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42601860-42611859 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066393 5270 Rosid View MSA
123747099 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2086 0.0 44.4176    
cufflinks 11.8563 0.0 33.0488    
cufflinks 10.4141 0.0 24.5173    
cufflinks 4.60009 0.0 12.1626    
cufflinks 1.81516 0.0 5.51764   Low
cufflinks 39.3162 0.0 88.2901 High High

0 Strain