Gene : Eucgr.A02683 E. grandis v2.0
Defline:  (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  2408
Name:  ? Eucgr.A02683 Secondary Identifier:  ? PAC:32047319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02683 0.5kb upstream 0.5kb upstream 4245 true Chr01: 42116260-42120504 Eucalyptus grandis
Eucgr.A02683 0.5kb upstream 0.5kb upstream 500 false Chr01: 42116260-42116759 Eucalyptus grandis
Eucgr.A02683 0.5kb downstream 0.5kb downstream 4245 true Chr01: 42116760-42121004 Eucalyptus grandis
Eucgr.A02683 0.5kb downstream 0.5kb downstream 500 false Chr01: 42120505-42121004 Eucalyptus grandis
Eucgr.A02683 1.0kb upstream 1.0kb upstream 4745 true Chr01: 42115760-42120504 Eucalyptus grandis
Eucgr.A02683 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42115760-42116759 Eucalyptus grandis
Eucgr.A02683 1.0kb downstream 1.0kb downstream 4745 true Chr01: 42116760-42121504 Eucalyptus grandis
Eucgr.A02683 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42120505-42121504 Eucalyptus grandis
Eucgr.A02683 2.0kb upstream 2.0kb upstream 5745 true Chr01: 42114760-42120504 Eucalyptus grandis
Eucgr.A02683 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42114760-42116759 Eucalyptus grandis
Eucgr.A02683 2.0kb downstream 2.0kb downstream 5745 true Chr01: 42116760-42122504 Eucalyptus grandis
Eucgr.A02683 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42120505-42122504 Eucalyptus grandis
Eucgr.A02683 5.0kb upstream 5.0kb upstream 8745 true Chr01: 42111760-42120504 Eucalyptus grandis
Eucgr.A02683 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42111760-42116759 Eucalyptus grandis
Eucgr.A02683 5.0kb downstream 5.0kb downstream 8745 true Chr01: 42116760-42125504 Eucalyptus grandis
Eucgr.A02683 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42120505-42125504 Eucalyptus grandis
Eucgr.A02683 10.0kb upstream 10.0kb upstream 13745 true Chr01: 42106760-42120504 Eucalyptus grandis
Eucgr.A02683 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42106760-42116759 Eucalyptus grandis
Eucgr.A02683 10.0kb downstream 10.0kb downstream 13745 true Chr01: 42116760-42130504 Eucalyptus grandis
Eucgr.A02683 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42120505-42130504 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9005 0.0 30.5314    
cufflinks 8.48475 0.0 21.0209   Low
cufflinks 11.3318 0.0 27.1514    
cufflinks 13.2079 0.0 31.0955    
cufflinks 10.4723 0.0 25.2942    
cufflinks 19.9047 0.0 48.6174   High

0 Strain