Gene : Eucgr.A02717 E. grandis v2.0
Defline:  (1 of 1) PTHR12653 - NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT Genomic Order:  2436
Name:  ? Eucgr.A02717 Secondary Identifier:  ? PAC:32046369
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3781 Eucalyptus grandis pathologic  
Egrandis PWY-4302 Eucalyptus grandis pathologic  
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02717 0.5kb upstream 0.5kb upstream 2556 true Chr01: 42464512-42467067 Eucalyptus grandis
Eucgr.A02717 0.5kb upstream 0.5kb upstream 500 false Chr01: 42466568-42467067 Eucalyptus grandis
Eucgr.A02717 0.5kb downstream 0.5kb downstream 2556 true Chr01: 42464012-42466567 Eucalyptus grandis
Eucgr.A02717 0.5kb downstream 0.5kb downstream 500 false Chr01: 42464012-42464511 Eucalyptus grandis
Eucgr.A02717 1.0kb upstream 1.0kb upstream 3056 true Chr01: 42464512-42467567 Eucalyptus grandis
Eucgr.A02717 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42466568-42467567 Eucalyptus grandis
Eucgr.A02717 1.0kb downstream 1.0kb downstream 3056 true Chr01: 42463512-42466567 Eucalyptus grandis
Eucgr.A02717 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42463512-42464511 Eucalyptus grandis
Eucgr.A02717 2.0kb upstream 2.0kb upstream 4056 true Chr01: 42464512-42468567 Eucalyptus grandis
Eucgr.A02717 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42466568-42468567 Eucalyptus grandis
Eucgr.A02717 2.0kb downstream 2.0kb downstream 4056 true Chr01: 42462512-42466567 Eucalyptus grandis
Eucgr.A02717 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42462512-42464511 Eucalyptus grandis
Eucgr.A02717 5.0kb upstream 5.0kb upstream 7056 true Chr01: 42464512-42471567 Eucalyptus grandis
Eucgr.A02717 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42466568-42471567 Eucalyptus grandis
Eucgr.A02717 5.0kb downstream 5.0kb downstream 7056 true Chr01: 42459512-42466567 Eucalyptus grandis
Eucgr.A02717 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42459512-42464511 Eucalyptus grandis
Eucgr.A02717 10.0kb upstream 10.0kb upstream 12056 true Chr01: 42464512-42476567 Eucalyptus grandis
Eucgr.A02717 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42466568-42476567 Eucalyptus grandis
Eucgr.A02717 10.0kb downstream 10.0kb downstream 12056 true Chr01: 42454512-42466567 Eucalyptus grandis
Eucgr.A02717 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42454512-42464511 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062156 5270 Rosid View MSA
123746684 5271 Pentapetalae View MSA
122793843 5272 Eudicot View MSA
122046813 5273 Angiosperm View MSA
121348614 5274 Embryophyte View MSA
123425136 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.3395 0.0 193.012 High  
cufflinks 91.0953 0.0 204.105 High  
cufflinks 59.7199 0.0 132.253 High Low
cufflinks 97.4002 0.0 219.088 High High
cufflinks 80.7612 0.0 180.047 High  
cufflinks 68.2829 0.0 151.805 High  

0 Strain