Gene : Eucgr.A02624 E. grandis v2.0
Defline:  (1 of 3) PTHR11010//PTHR11010:SF48 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED Genomic Order:  2352
Name:  ? Eucgr.A02624 Secondary Identifier:  ? PAC:32048416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02624 0.5kb upstream 0.5kb upstream 4902 true Chr01: 41485043-41489944 Eucalyptus grandis
Eucgr.A02624 0.5kb upstream 0.5kb upstream 500 false Chr01: 41485043-41485542 Eucalyptus grandis
Eucgr.A02624 0.5kb downstream 0.5kb downstream 4902 true Chr01: 41485543-41490444 Eucalyptus grandis
Eucgr.A02624 0.5kb downstream 0.5kb downstream 500 false Chr01: 41489945-41490444 Eucalyptus grandis
Eucgr.A02624 1.0kb upstream 1.0kb upstream 5402 true Chr01: 41484543-41489944 Eucalyptus grandis
Eucgr.A02624 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41484543-41485542 Eucalyptus grandis
Eucgr.A02624 1.0kb downstream 1.0kb downstream 5402 true Chr01: 41485543-41490944 Eucalyptus grandis
Eucgr.A02624 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41489945-41490944 Eucalyptus grandis
Eucgr.A02624 2.0kb upstream 2.0kb upstream 6402 true Chr01: 41483543-41489944 Eucalyptus grandis
Eucgr.A02624 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41483543-41485542 Eucalyptus grandis
Eucgr.A02624 2.0kb downstream 2.0kb downstream 6402 true Chr01: 41485543-41491944 Eucalyptus grandis
Eucgr.A02624 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41489945-41491944 Eucalyptus grandis
Eucgr.A02624 5.0kb upstream 5.0kb upstream 9402 true Chr01: 41480543-41489944 Eucalyptus grandis
Eucgr.A02624 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41480543-41485542 Eucalyptus grandis
Eucgr.A02624 5.0kb downstream 5.0kb downstream 9402 true Chr01: 41485543-41494944 Eucalyptus grandis
Eucgr.A02624 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41489945-41494944 Eucalyptus grandis
Eucgr.A02624 10.0kb upstream 10.0kb upstream 14402 true Chr01: 41475543-41489944 Eucalyptus grandis
Eucgr.A02624 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41475543-41485542 Eucalyptus grandis
Eucgr.A02624 10.0kb downstream 10.0kb downstream 14402 true Chr01: 41485543-41499944 Eucalyptus grandis
Eucgr.A02624 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41489945-41499944 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070997 5270 Rosid View MSA
123753394 5271 Pentapetalae View MSA
122793921 5272 Eudicot View MSA
122049838 5273 Angiosperm View MSA
121344690 5274 Embryophyte View MSA
123428837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.795474 0.0 2.63791    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.321756 0.0 1.29271 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.79468 0.0 7.72019   High
cufflinks 0.802759 0.0 2.73471 Low  

0 Strain