Gene : Eucgr.A02536 E. grandis v2.0
Defline:  (1 of 1) 1.1.2.4 - D-lactate dehydrogenase (cytochrome) / Lactic acid dehydrogenase Genomic Order:  2271
Name:  ? Eucgr.A02536 Secondary Identifier:  ? PAC:32048734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02536 0.5kb upstream 0.5kb upstream 12811 true Chr01: 40605983-40618793 Eucalyptus grandis
Eucgr.A02536 0.5kb upstream 0.5kb upstream 500 false Chr01: 40605983-40606482 Eucalyptus grandis
Eucgr.A02536 0.5kb downstream 0.5kb downstream 12811 true Chr01: 40606483-40619293 Eucalyptus grandis
Eucgr.A02536 0.5kb downstream 0.5kb downstream 500 false Chr01: 40618794-40619293 Eucalyptus grandis
Eucgr.A02536 1.0kb upstream 1.0kb upstream 13311 true Chr01: 40605483-40618793 Eucalyptus grandis
Eucgr.A02536 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40605483-40606482 Eucalyptus grandis
Eucgr.A02536 1.0kb downstream 1.0kb downstream 13311 true Chr01: 40606483-40619793 Eucalyptus grandis
Eucgr.A02536 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40618794-40619793 Eucalyptus grandis
Eucgr.A02536 2.0kb upstream 2.0kb upstream 14311 true Chr01: 40604483-40618793 Eucalyptus grandis
Eucgr.A02536 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40604483-40606482 Eucalyptus grandis
Eucgr.A02536 2.0kb downstream 2.0kb downstream 14311 true Chr01: 40606483-40620793 Eucalyptus grandis
Eucgr.A02536 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40618794-40620793 Eucalyptus grandis
Eucgr.A02536 5.0kb upstream 5.0kb upstream 17311 true Chr01: 40601483-40618793 Eucalyptus grandis
Eucgr.A02536 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40601483-40606482 Eucalyptus grandis
Eucgr.A02536 5.0kb downstream 5.0kb downstream 17311 true Chr01: 40606483-40623793 Eucalyptus grandis
Eucgr.A02536 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40618794-40623793 Eucalyptus grandis
Eucgr.A02536 10.0kb upstream 10.0kb upstream 22311 true Chr01: 40596483-40618793 Eucalyptus grandis
Eucgr.A02536 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40596483-40606482 Eucalyptus grandis
Eucgr.A02536 10.0kb downstream 10.0kb downstream 22311 true Chr01: 40606483-40628793 Eucalyptus grandis
Eucgr.A02536 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40618794-40628793 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062215 5270 Rosid View MSA
123743923 5271 Pentapetalae View MSA
122792019 5272 Eudicot View MSA
122041768 5273 Angiosperm View MSA
121347164 5274 Embryophyte View MSA
123425580 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.80352 0.0 22.355    
cufflinks 10.7543 0.0 24.3675    
cufflinks 4.09691 0.0 10.0197    
cufflinks 11.2193 0.0 25.3299    
cufflinks 3.50339 0.0 8.70589   Low
cufflinks 5.81915 0.0 13.8051    

0 Strain