Gene : Eucgr.A02545 E. grandis v2.0
Defline:  (1 of 1) PTHR24349:SF81 - CALCIUM-DEPENDENT PROTEIN KINASE 20 Genomic Order:  2280
Name:  ? Eucgr.A02545 Secondary Identifier:  ? PAC:32048304
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02545 0.5kb upstream 0.5kb upstream 6757 true Chr01: 40679575-40686331 Eucalyptus grandis
Eucgr.A02545 0.5kb upstream 0.5kb upstream 500 false Chr01: 40679575-40680074 Eucalyptus grandis
Eucgr.A02545 0.5kb downstream 0.5kb downstream 6757 true Chr01: 40680075-40686831 Eucalyptus grandis
Eucgr.A02545 0.5kb downstream 0.5kb downstream 500 false Chr01: 40686332-40686831 Eucalyptus grandis
Eucgr.A02545 1.0kb upstream 1.0kb upstream 7257 true Chr01: 40679075-40686331 Eucalyptus grandis
Eucgr.A02545 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40679075-40680074 Eucalyptus grandis
Eucgr.A02545 1.0kb downstream 1.0kb downstream 7257 true Chr01: 40680075-40687331 Eucalyptus grandis
Eucgr.A02545 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40686332-40687331 Eucalyptus grandis
Eucgr.A02545 2.0kb upstream 2.0kb upstream 8257 true Chr01: 40678075-40686331 Eucalyptus grandis
Eucgr.A02545 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40678075-40680074 Eucalyptus grandis
Eucgr.A02545 2.0kb downstream 2.0kb downstream 8257 true Chr01: 40680075-40688331 Eucalyptus grandis
Eucgr.A02545 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40686332-40688331 Eucalyptus grandis
Eucgr.A02545 5.0kb upstream 5.0kb upstream 11257 true Chr01: 40675075-40686331 Eucalyptus grandis
Eucgr.A02545 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40675075-40680074 Eucalyptus grandis
Eucgr.A02545 5.0kb downstream 5.0kb downstream 11257 true Chr01: 40680075-40691331 Eucalyptus grandis
Eucgr.A02545 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40686332-40691331 Eucalyptus grandis
Eucgr.A02545 10.0kb upstream 10.0kb upstream 16257 true Chr01: 40670075-40686331 Eucalyptus grandis
Eucgr.A02545 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40670075-40680074 Eucalyptus grandis
Eucgr.A02545 10.0kb downstream 10.0kb downstream 16257 true Chr01: 40680075-40696331 Eucalyptus grandis
Eucgr.A02545 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40686332-40696331 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067641 5270 Rosid View MSA
123746837 5271 Pentapetalae View MSA
122788348 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71274 0.0 4.44723    
cufflinks 5.24509 0.0 12.1726   High
cufflinks 1.03831 0.0 2.82244   Low
cufflinks 4.43534 0.0 10.412    
cufflinks 2.36556 0.0 5.92496    
cufflinks 4.44022 0.0 10.5165    

0 Strain