Gene : Eucgr.B00193 E. grandis v2.0
Defline:  (1 of 2) PTHR12231:SF150 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC Genomic Order:  108
Name:  ? Eucgr.B00193 Secondary Identifier:  ? PAC:32060358
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00193 0.5kb upstream 0.5kb upstream 5957 true Chr02: 1358428-1364384 Eucalyptus grandis
Eucgr.B00193 0.5kb upstream 0.5kb upstream 500 false Chr02: 1358428-1358927 Eucalyptus grandis
Eucgr.B00193 0.5kb downstream 0.5kb downstream 5957 true Chr02: 1358928-1364884 Eucalyptus grandis
Eucgr.B00193 0.5kb downstream 0.5kb downstream 500 false Chr02: 1364385-1364884 Eucalyptus grandis
Eucgr.B00193 1.0kb upstream 1.0kb upstream 6457 true Chr02: 1357928-1364384 Eucalyptus grandis
Eucgr.B00193 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1357928-1358927 Eucalyptus grandis
Eucgr.B00193 1.0kb downstream 1.0kb downstream 6457 true Chr02: 1358928-1365384 Eucalyptus grandis
Eucgr.B00193 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1364385-1365384 Eucalyptus grandis
Eucgr.B00193 2.0kb upstream 2.0kb upstream 7457 true Chr02: 1356928-1364384 Eucalyptus grandis
Eucgr.B00193 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1356928-1358927 Eucalyptus grandis
Eucgr.B00193 2.0kb downstream 2.0kb downstream 7457 true Chr02: 1358928-1366384 Eucalyptus grandis
Eucgr.B00193 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1364385-1366384 Eucalyptus grandis
Eucgr.B00193 5.0kb upstream 5.0kb upstream 10457 true Chr02: 1353928-1364384 Eucalyptus grandis
Eucgr.B00193 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1353928-1358927 Eucalyptus grandis
Eucgr.B00193 5.0kb downstream 5.0kb downstream 10457 true Chr02: 1358928-1369384 Eucalyptus grandis
Eucgr.B00193 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1364385-1369384 Eucalyptus grandis
Eucgr.B00193 10.0kb upstream 10.0kb upstream 15457 true Chr02: 1348928-1364384 Eucalyptus grandis
Eucgr.B00193 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1348928-1358927 Eucalyptus grandis
Eucgr.B00193 10.0kb downstream 10.0kb downstream 15457 true Chr02: 1358928-1374384 Eucalyptus grandis
Eucgr.B00193 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1364385-1374384 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062232 5270 Rosid View MSA
123739667 5271 Pentapetalae View MSA
122790704 5272 Eudicot View MSA
122048365 5273 Angiosperm View MSA
121346213 5274 Embryophyte View MSA
123428656 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.50871 0.0 21.7169    
cufflinks 0.910857 0.0 3.08538   Low
cufflinks 4.98865 0.0 13.815    
cufflinks 1.38805 0.0 4.1573    
cufflinks 1.28073 0.0 4.06584    
cufflinks 18.5541 0.0 43.2494   High

0 Strain