Gene : Eucgr.B00092 E. grandis v2.0
Defline:  (1 of 4) PTHR12300//PTHR12300:SF58 - HVA22-LIKE PROTEINS Genomic Order:  17
Name:  ? Eucgr.B00092 Secondary Identifier:  ? PAC:32061517
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00092 0.5kb upstream 0.5kb upstream 1301 true Chr02: 305245-306545 Eucalyptus grandis
Eucgr.B00092 0.5kb upstream 0.5kb upstream 500 false Chr02: 306046-306545 Eucalyptus grandis
Eucgr.B00092 0.5kb downstream 0.5kb downstream 1301 true Chr02: 304745-306045 Eucalyptus grandis
Eucgr.B00092 0.5kb downstream 0.5kb downstream 500 false Chr02: 304745-305244 Eucalyptus grandis
Eucgr.B00092 1.0kb upstream 1.0kb upstream 1801 true Chr02: 305245-307045 Eucalyptus grandis
Eucgr.B00092 1.0kb upstream 1.0kb upstream 1000 false Chr02: 306046-307045 Eucalyptus grandis
Eucgr.B00092 1.0kb downstream 1.0kb downstream 1801 true Chr02: 304245-306045 Eucalyptus grandis
Eucgr.B00092 1.0kb downstream 1.0kb downstream 1000 false Chr02: 304245-305244 Eucalyptus grandis
Eucgr.B00092 2.0kb upstream 2.0kb upstream 2801 true Chr02: 305245-308045 Eucalyptus grandis
Eucgr.B00092 2.0kb upstream 2.0kb upstream 2000 false Chr02: 306046-308045 Eucalyptus grandis
Eucgr.B00092 2.0kb downstream 2.0kb downstream 2801 true Chr02: 303245-306045 Eucalyptus grandis
Eucgr.B00092 2.0kb downstream 2.0kb downstream 2000 false Chr02: 303245-305244 Eucalyptus grandis
Eucgr.B00092 5.0kb upstream 5.0kb upstream 5801 true Chr02: 305245-311045 Eucalyptus grandis
Eucgr.B00092 5.0kb upstream 5.0kb upstream 5000 false Chr02: 306046-311045 Eucalyptus grandis
Eucgr.B00092 5.0kb downstream 5.0kb downstream 5801 true Chr02: 300245-306045 Eucalyptus grandis
Eucgr.B00092 5.0kb downstream 5.0kb downstream 5000 false Chr02: 300245-305244 Eucalyptus grandis
Eucgr.B00092 10.0kb upstream 10.0kb upstream 10801 true Chr02: 305245-316045 Eucalyptus grandis
Eucgr.B00092 10.0kb upstream 10.0kb upstream 10000 false Chr02: 306046-316045 Eucalyptus grandis
Eucgr.B00092 10.0kb downstream 10.0kb downstream 10801 true Chr02: 295245-306045 Eucalyptus grandis
Eucgr.B00092 10.0kb downstream 10.0kb downstream 10000 false Chr02: 295245-305244 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.989121 0.0 5.19939    
cufflinks 0.482266 0.0 3.7557 Low Low
cufflinks 0.793303 0.0 4.41426    
cufflinks 1.38417 0.0 5.95616   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.961784 0.0 5.26075    

0 Strain