Gene : Eucgr.L00043 E. grandis v2.0
Defline:  (1 of 3) PTHR24006:SF492 - F-BOX/LRR-REPEAT PROTEIN 5 Genomic Order:  197
Name:  ? Eucgr.L00043 Secondary Identifier:  ? PAC:32048955
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00043 0.5kb upstream 0.5kb upstream 2290 true Chr01: 3810657-3812946 Eucalyptus grandis
Eucgr.L00043 0.5kb upstream 0.5kb upstream 500 false Chr01: 3810657-3811156 Eucalyptus grandis
Eucgr.L00043 0.5kb downstream 0.5kb downstream 2290 true Chr01: 3811157-3813446 Eucalyptus grandis
Eucgr.L00043 0.5kb downstream 0.5kb downstream 500 false Chr01: 3812947-3813446 Eucalyptus grandis
Eucgr.L00043 1.0kb upstream 1.0kb upstream 2790 true Chr01: 3810157-3812946 Eucalyptus grandis
Eucgr.L00043 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3810157-3811156 Eucalyptus grandis
Eucgr.L00043 1.0kb downstream 1.0kb downstream 2790 true Chr01: 3811157-3813946 Eucalyptus grandis
Eucgr.L00043 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3812947-3813946 Eucalyptus grandis
Eucgr.L00043 2.0kb upstream 2.0kb upstream 3790 true Chr01: 3809157-3812946 Eucalyptus grandis
Eucgr.L00043 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3809157-3811156 Eucalyptus grandis
Eucgr.L00043 2.0kb downstream 2.0kb downstream 3790 true Chr01: 3811157-3814946 Eucalyptus grandis
Eucgr.L00043 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3812947-3814946 Eucalyptus grandis
Eucgr.L00043 5.0kb upstream 5.0kb upstream 6790 true Chr01: 3806157-3812946 Eucalyptus grandis
Eucgr.L00043 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3806157-3811156 Eucalyptus grandis
Eucgr.L00043 5.0kb downstream 5.0kb downstream 6790 true Chr01: 3811157-3817946 Eucalyptus grandis
Eucgr.L00043 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3812947-3817946 Eucalyptus grandis
Eucgr.L00043 10.0kb upstream 10.0kb upstream 11790 true Chr01: 3801157-3812946 Eucalyptus grandis
Eucgr.L00043 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3801157-3811156 Eucalyptus grandis
Eucgr.L00043 10.0kb downstream 10.0kb downstream 11790 true Chr01: 3811157-3822946 Eucalyptus grandis
Eucgr.L00043 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3812947-3822946 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066290 5270 Rosid View MSA
123750705 5271 Pentapetalae View MSA
122788712 5272 Eudicot View MSA
122042802 5273 Angiosperm View MSA
121310027 5274 Embryophyte View MSA
123347630 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.740225 0.0 2.28103    
cufflinks 8.94562 0.0 21.4441   High
cufflinks 0.850841 0.0 2.5956    
cufflinks 0.74808 0.0 2.32442    
cufflinks 0.885338 0.0 2.69241    
cufflinks 1.65339 0.0 4.6475    

0 Strain