Gene : Eucgr.A02960 E. grandis v2.0
Defline:  (1 of 4) KOG0305 - Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits Genomic Order:  2662
Name:  ? Eucgr.A02960 Secondary Identifier:  ? PAC:32046398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02960 0.5kb upstream 0.5kb upstream 3150 true Chr01: 44627513-44630662 Eucalyptus grandis
Eucgr.A02960 0.5kb upstream 0.5kb upstream 500 false Chr01: 44630163-44630662 Eucalyptus grandis
Eucgr.A02960 0.5kb downstream 0.5kb downstream 3150 true Chr01: 44627013-44630162 Eucalyptus grandis
Eucgr.A02960 0.5kb downstream 0.5kb downstream 500 false Chr01: 44627013-44627512 Eucalyptus grandis
Eucgr.A02960 1.0kb upstream 1.0kb upstream 3650 true Chr01: 44627513-44631162 Eucalyptus grandis
Eucgr.A02960 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44630163-44631162 Eucalyptus grandis
Eucgr.A02960 1.0kb downstream 1.0kb downstream 3650 true Chr01: 44626513-44630162 Eucalyptus grandis
Eucgr.A02960 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44626513-44627512 Eucalyptus grandis
Eucgr.A02960 2.0kb upstream 2.0kb upstream 4650 true Chr01: 44627513-44632162 Eucalyptus grandis
Eucgr.A02960 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44630163-44632162 Eucalyptus grandis
Eucgr.A02960 2.0kb downstream 2.0kb downstream 4650 true Chr01: 44625513-44630162 Eucalyptus grandis
Eucgr.A02960 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44625513-44627512 Eucalyptus grandis
Eucgr.A02960 5.0kb upstream 5.0kb upstream 7650 true Chr01: 44627513-44635162 Eucalyptus grandis
Eucgr.A02960 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44630163-44635162 Eucalyptus grandis
Eucgr.A02960 5.0kb downstream 5.0kb downstream 7650 true Chr01: 44622513-44630162 Eucalyptus grandis
Eucgr.A02960 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44622513-44627512 Eucalyptus grandis
Eucgr.A02960 10.0kb upstream 10.0kb upstream 12650 true Chr01: 44627513-44640162 Eucalyptus grandis
Eucgr.A02960 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44630163-44640162 Eucalyptus grandis
Eucgr.A02960 10.0kb downstream 10.0kb downstream 12650 true Chr01: 44617513-44630162 Eucalyptus grandis
Eucgr.A02960 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44617513-44627512 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064286 5270 Rosid View MSA
123744022 5271 Pentapetalae View MSA
122786421 5272 Eudicot View MSA
122050288 5273 Angiosperm View MSA
121350225 5274 Embryophyte View MSA
123424579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.0357 0.0 85.0815 High High
cufflinks 5.16253 0.0 12.3808    
cufflinks 17.2222 0.0 44.5028    
cufflinks 1.31765 0.0 3.83362    
cufflinks 21.5955 0.0 54.3614    
cufflinks 0.671061 0.0 2.35212 Low Low

0 Strain