Gene : Eucgr.A02943 E. grandis v2.0
Defline:  (1 of 3) PTHR31773:SF11 - METACASPASE-2 Genomic Order:  2648
Name:  ? Eucgr.A02943 Secondary Identifier:  ? PAC:32047356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02943 0.5kb upstream 0.5kb upstream 4074 true Chr01: 44516246-44520319 Eucalyptus grandis
Eucgr.A02943 0.5kb upstream 0.5kb upstream 500 false Chr01: 44516246-44516745 Eucalyptus grandis
Eucgr.A02943 0.5kb downstream 0.5kb downstream 4074 true Chr01: 44516746-44520819 Eucalyptus grandis
Eucgr.A02943 0.5kb downstream 0.5kb downstream 500 false Chr01: 44520320-44520819 Eucalyptus grandis
Eucgr.A02943 1.0kb upstream 1.0kb upstream 4574 true Chr01: 44515746-44520319 Eucalyptus grandis
Eucgr.A02943 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44515746-44516745 Eucalyptus grandis
Eucgr.A02943 1.0kb downstream 1.0kb downstream 4574 true Chr01: 44516746-44521319 Eucalyptus grandis
Eucgr.A02943 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44520320-44521319 Eucalyptus grandis
Eucgr.A02943 2.0kb upstream 2.0kb upstream 5574 true Chr01: 44514746-44520319 Eucalyptus grandis
Eucgr.A02943 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44514746-44516745 Eucalyptus grandis
Eucgr.A02943 2.0kb downstream 2.0kb downstream 5574 true Chr01: 44516746-44522319 Eucalyptus grandis
Eucgr.A02943 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44520320-44522319 Eucalyptus grandis
Eucgr.A02943 5.0kb upstream 5.0kb upstream 8574 true Chr01: 44511746-44520319 Eucalyptus grandis
Eucgr.A02943 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44511746-44516745 Eucalyptus grandis
Eucgr.A02943 5.0kb downstream 5.0kb downstream 8574 true Chr01: 44516746-44525319 Eucalyptus grandis
Eucgr.A02943 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44520320-44525319 Eucalyptus grandis
Eucgr.A02943 10.0kb upstream 10.0kb upstream 13574 true Chr01: 44506746-44520319 Eucalyptus grandis
Eucgr.A02943 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44506746-44516745 Eucalyptus grandis
Eucgr.A02943 10.0kb downstream 10.0kb downstream 13574 true Chr01: 44516746-44530319 Eucalyptus grandis
Eucgr.A02943 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44520320-44530319 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073381 5270 Rosid View MSA
123741855 5271 Pentapetalae View MSA
122790648 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.91047 0.0 20.9589    
cufflinks 21.2512 0.0 53.6372    
cufflinks 14.578 0.0 38.9311    
cufflinks 19.9382 0.0 49.3062    
cufflinks 37.6085 0.0 92.7706   High
cufflinks 4.00164 0.0 11.6079   Low

0 Strain