Gene : Eucgr.B00569 E. grandis v2.0
Defline:  (1 of 4) PTHR19305 - SYNAPTOSOMAL ASSOCIATED PROTEIN Genomic Order:  442
Name:  ? Eucgr.B00569 Secondary Identifier:  ? PAC:32060224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00569 0.5kb upstream 0.5kb upstream 3909 true Chr02: 5829791-5833699 Eucalyptus grandis
Eucgr.B00569 0.5kb upstream 0.5kb upstream 500 false Chr02: 5833200-5833699 Eucalyptus grandis
Eucgr.B00569 0.5kb downstream 0.5kb downstream 3909 true Chr02: 5829291-5833199 Eucalyptus grandis
Eucgr.B00569 0.5kb downstream 0.5kb downstream 500 false Chr02: 5829291-5829790 Eucalyptus grandis
Eucgr.B00569 1.0kb upstream 1.0kb upstream 4409 true Chr02: 5829791-5834199 Eucalyptus grandis
Eucgr.B00569 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5833200-5834199 Eucalyptus grandis
Eucgr.B00569 1.0kb downstream 1.0kb downstream 4409 true Chr02: 5828791-5833199 Eucalyptus grandis
Eucgr.B00569 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5828791-5829790 Eucalyptus grandis
Eucgr.B00569 2.0kb upstream 2.0kb upstream 5409 true Chr02: 5829791-5835199 Eucalyptus grandis
Eucgr.B00569 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5833200-5835199 Eucalyptus grandis
Eucgr.B00569 2.0kb downstream 2.0kb downstream 5409 true Chr02: 5827791-5833199 Eucalyptus grandis
Eucgr.B00569 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5827791-5829790 Eucalyptus grandis
Eucgr.B00569 5.0kb upstream 5.0kb upstream 8409 true Chr02: 5829791-5838199 Eucalyptus grandis
Eucgr.B00569 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5833200-5838199 Eucalyptus grandis
Eucgr.B00569 5.0kb downstream 5.0kb downstream 8409 true Chr02: 5824791-5833199 Eucalyptus grandis
Eucgr.B00569 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5824791-5829790 Eucalyptus grandis
Eucgr.B00569 10.0kb upstream 10.0kb upstream 13409 true Chr02: 5829791-5843199 Eucalyptus grandis
Eucgr.B00569 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5833200-5843199 Eucalyptus grandis
Eucgr.B00569 10.0kb downstream 10.0kb downstream 13409 true Chr02: 5819791-5833199 Eucalyptus grandis
Eucgr.B00569 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5819791-5829790 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.196214 0.0 0.996461 Low Low
cufflinks 1.52419 0.0 4.70985    
cufflinks 1.83325 0.0 5.55762    
cufflinks 0.629013 0.0 2.37174    
cufflinks 1.62929 0.0 5.21031    
cufflinks 3.8288 0.0 10.7692   High

0 Strain