Gene : Eucgr.B00479 E. grandis v2.0
Defline:  (1 of 2) PTHR11875:SF60 - NAP1-RELATED PROTEIN 1-RELATED Genomic Order:  361
Name:  ? Eucgr.B00479 Secondary Identifier:  ? PAC:32060115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00479 0.5kb upstream 0.5kb upstream 4476 true Chr02: 4553236-4557711 Eucalyptus grandis
Eucgr.B00479 0.5kb upstream 0.5kb upstream 500 false Chr02: 4557212-4557711 Eucalyptus grandis
Eucgr.B00479 0.5kb downstream 0.5kb downstream 4476 true Chr02: 4552736-4557211 Eucalyptus grandis
Eucgr.B00479 0.5kb downstream 0.5kb downstream 500 false Chr02: 4552736-4553235 Eucalyptus grandis
Eucgr.B00479 1.0kb upstream 1.0kb upstream 4976 true Chr02: 4553236-4558211 Eucalyptus grandis
Eucgr.B00479 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4557212-4558211 Eucalyptus grandis
Eucgr.B00479 1.0kb downstream 1.0kb downstream 4976 true Chr02: 4552236-4557211 Eucalyptus grandis
Eucgr.B00479 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4552236-4553235 Eucalyptus grandis
Eucgr.B00479 2.0kb upstream 2.0kb upstream 5976 true Chr02: 4553236-4559211 Eucalyptus grandis
Eucgr.B00479 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4557212-4559211 Eucalyptus grandis
Eucgr.B00479 2.0kb downstream 2.0kb downstream 5976 true Chr02: 4551236-4557211 Eucalyptus grandis
Eucgr.B00479 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4551236-4553235 Eucalyptus grandis
Eucgr.B00479 5.0kb upstream 5.0kb upstream 8976 true Chr02: 4553236-4562211 Eucalyptus grandis
Eucgr.B00479 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4557212-4562211 Eucalyptus grandis
Eucgr.B00479 5.0kb downstream 5.0kb downstream 8976 true Chr02: 4548236-4557211 Eucalyptus grandis
Eucgr.B00479 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4548236-4553235 Eucalyptus grandis
Eucgr.B00479 10.0kb upstream 10.0kb upstream 13976 true Chr02: 4553236-4567211 Eucalyptus grandis
Eucgr.B00479 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4557212-4567211 Eucalyptus grandis
Eucgr.B00479 10.0kb downstream 10.0kb downstream 13976 true Chr02: 4543236-4557211 Eucalyptus grandis
Eucgr.B00479 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4543236-4553235 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073119 5270 Rosid View MSA
123751340 5271 Pentapetalae View MSA
122794280 5272 Eudicot View MSA
122049668 5273 Angiosperm View MSA
121348262 5274 Embryophyte View MSA
123426622 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.9325 0.0 59.3857    
cufflinks 22.4605 0.0 51.7879    
cufflinks 23.9142 0.0 55.006    
cufflinks 26.1771 0.0 59.7234    
cufflinks 37.4194 0.0 83.8373   High
cufflinks 19.417 0.0 45.7656   Low

0 Strain