Gene : Eucgr.B00511 E. grandis v2.0
Defline:  (1 of 2) PTHR11540//PTHR11540:SF29 - MALATE AND LACTATE DEHYDROGENASE Genomic Order:  388
Name:  ? Eucgr.B00511 Secondary Identifier:  ? PAC:32061218
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLUCONEO-PWY Eucalyptus grandis pathologic  
Egrandis GLYOXYLATE-BYPASS Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-5690 Eucalyptus grandis pathologic  
Egrandis PWY66-399 Eucalyptus grandis pathologic  
Egrandis PWY-7115 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00511 0.5kb upstream 0.5kb upstream 3231 true Chr02: 5270749-5273979 Eucalyptus grandis
Eucgr.B00511 0.5kb upstream 0.5kb upstream 500 false Chr02: 5273480-5273979 Eucalyptus grandis
Eucgr.B00511 0.5kb downstream 0.5kb downstream 3231 true Chr02: 5270249-5273479 Eucalyptus grandis
Eucgr.B00511 0.5kb downstream 0.5kb downstream 500 false Chr02: 5270249-5270748 Eucalyptus grandis
Eucgr.B00511 1.0kb upstream 1.0kb upstream 3731 true Chr02: 5270749-5274479 Eucalyptus grandis
Eucgr.B00511 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5273480-5274479 Eucalyptus grandis
Eucgr.B00511 1.0kb downstream 1.0kb downstream 3731 true Chr02: 5269749-5273479 Eucalyptus grandis
Eucgr.B00511 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5269749-5270748 Eucalyptus grandis
Eucgr.B00511 2.0kb upstream 2.0kb upstream 4731 true Chr02: 5270749-5275479 Eucalyptus grandis
Eucgr.B00511 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5273480-5275479 Eucalyptus grandis
Eucgr.B00511 2.0kb downstream 2.0kb downstream 4731 true Chr02: 5268749-5273479 Eucalyptus grandis
Eucgr.B00511 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5268749-5270748 Eucalyptus grandis
Eucgr.B00511 5.0kb upstream 5.0kb upstream 7731 true Chr02: 5270749-5278479 Eucalyptus grandis
Eucgr.B00511 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5273480-5278479 Eucalyptus grandis
Eucgr.B00511 5.0kb downstream 5.0kb downstream 7731 true Chr02: 5265749-5273479 Eucalyptus grandis
Eucgr.B00511 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5265749-5270748 Eucalyptus grandis
Eucgr.B00511 10.0kb upstream 10.0kb upstream 12731 true Chr02: 5270749-5283479 Eucalyptus grandis
Eucgr.B00511 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5273480-5283479 Eucalyptus grandis
Eucgr.B00511 10.0kb downstream 10.0kb downstream 12731 true Chr02: 5260749-5273479 Eucalyptus grandis
Eucgr.B00511 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5260749-5270748 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067628 5270 Rosid View MSA
123748297 5271 Pentapetalae View MSA
122785823 5272 Eudicot View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.19181 0.0 10.5289    
cufflinks 2.2454 0.0 6.27881   Low
cufflinks 4.94418 0.0 14.9906    
cufflinks 4.19298 0.0 10.5742    
cufflinks 4.80573 0.0 12.1029    
cufflinks 8.2872 0.0 19.3006   High

0 Strain