Gene : Eucgr.B00490 E. grandis v2.0
Defline:  (1 of 2) PTHR21717//PTHR21717:SF22 - TELOMERIC REPEAT BINDING PROTEIN Genomic Order:  369
Name:  ? Eucgr.B00490 Secondary Identifier:  ? PAC:32062250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00490 0.5kb upstream 0.5kb upstream 3787 true Chr02: 5153804-5157590 Eucalyptus grandis
Eucgr.B00490 0.5kb upstream 0.5kb upstream 500 false Chr02: 5153804-5154303 Eucalyptus grandis
Eucgr.B00490 0.5kb downstream 0.5kb downstream 3787 true Chr02: 5154304-5158090 Eucalyptus grandis
Eucgr.B00490 0.5kb downstream 0.5kb downstream 500 false Chr02: 5157591-5158090 Eucalyptus grandis
Eucgr.B00490 1.0kb upstream 1.0kb upstream 4287 true Chr02: 5153304-5157590 Eucalyptus grandis
Eucgr.B00490 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5153304-5154303 Eucalyptus grandis
Eucgr.B00490 1.0kb downstream 1.0kb downstream 4287 true Chr02: 5154304-5158590 Eucalyptus grandis
Eucgr.B00490 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5157591-5158590 Eucalyptus grandis
Eucgr.B00490 2.0kb upstream 2.0kb upstream 5287 true Chr02: 5152304-5157590 Eucalyptus grandis
Eucgr.B00490 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5152304-5154303 Eucalyptus grandis
Eucgr.B00490 2.0kb downstream 2.0kb downstream 5287 true Chr02: 5154304-5159590 Eucalyptus grandis
Eucgr.B00490 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5157591-5159590 Eucalyptus grandis
Eucgr.B00490 5.0kb upstream 5.0kb upstream 8287 true Chr02: 5149304-5157590 Eucalyptus grandis
Eucgr.B00490 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5149304-5154303 Eucalyptus grandis
Eucgr.B00490 5.0kb downstream 5.0kb downstream 8287 true Chr02: 5154304-5162590 Eucalyptus grandis
Eucgr.B00490 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5157591-5162590 Eucalyptus grandis
Eucgr.B00490 10.0kb upstream 10.0kb upstream 13287 true Chr02: 5144304-5157590 Eucalyptus grandis
Eucgr.B00490 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5144304-5154303 Eucalyptus grandis
Eucgr.B00490 10.0kb downstream 10.0kb downstream 13287 true Chr02: 5154304-5167590 Eucalyptus grandis
Eucgr.B00490 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5157591-5167590 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.68826 0.0 15.6648    
cufflinks 2.47209 0.0 6.41094   Low
cufflinks 8.38413 0.0 19.328   High
cufflinks 3.13 0.0 7.91349    
cufflinks 3.68293 0.0 9.17939    
cufflinks 5.76716 0.0 13.6369    

0 Strain