Gene : Eucgr.B00371 E. grandis v2.0
Defline:  (1 of 1) KOG1004 - Exosomal 3'-5' exoribonuclease complex subunit Rrp40 Genomic Order:  265
Name:  ? Eucgr.B00371 Secondary Identifier:  ? PAC:32061757
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00371 0.5kb upstream 0.5kb upstream 6304 true Chr02: 3591494-3597797 Eucalyptus grandis
Eucgr.B00371 0.5kb upstream 0.5kb upstream 500 false Chr02: 3591494-3591993 Eucalyptus grandis
Eucgr.B00371 0.5kb downstream 0.5kb downstream 6304 true Chr02: 3591994-3598297 Eucalyptus grandis
Eucgr.B00371 0.5kb downstream 0.5kb downstream 500 false Chr02: 3597798-3598297 Eucalyptus grandis
Eucgr.B00371 1.0kb upstream 1.0kb upstream 6804 true Chr02: 3590994-3597797 Eucalyptus grandis
Eucgr.B00371 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3590994-3591993 Eucalyptus grandis
Eucgr.B00371 1.0kb downstream 1.0kb downstream 6804 true Chr02: 3591994-3598797 Eucalyptus grandis
Eucgr.B00371 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3597798-3598797 Eucalyptus grandis
Eucgr.B00371 2.0kb upstream 2.0kb upstream 7804 true Chr02: 3589994-3597797 Eucalyptus grandis
Eucgr.B00371 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3589994-3591993 Eucalyptus grandis
Eucgr.B00371 2.0kb downstream 2.0kb downstream 7804 true Chr02: 3591994-3599797 Eucalyptus grandis
Eucgr.B00371 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3597798-3599797 Eucalyptus grandis
Eucgr.B00371 5.0kb upstream 5.0kb upstream 10804 true Chr02: 3586994-3597797 Eucalyptus grandis
Eucgr.B00371 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3586994-3591993 Eucalyptus grandis
Eucgr.B00371 5.0kb downstream 5.0kb downstream 10804 true Chr02: 3591994-3602797 Eucalyptus grandis
Eucgr.B00371 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3597798-3602797 Eucalyptus grandis
Eucgr.B00371 10.0kb upstream 10.0kb upstream 15804 true Chr02: 3581994-3597797 Eucalyptus grandis
Eucgr.B00371 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3581994-3591993 Eucalyptus grandis
Eucgr.B00371 10.0kb downstream 10.0kb downstream 15804 true Chr02: 3591994-3607797 Eucalyptus grandis
Eucgr.B00371 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3597798-3607797 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061201 5270 Rosid View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.65513 0.0 22.5583    
cufflinks 7.89989 0.0 18.7425   Low
cufflinks 8.77911 0.0 25.7696    
cufflinks 12.0744 0.0 29.0806   High
cufflinks 12.0465 0.0 27.6456   High
cufflinks 8.36798 0.0 23.1429    

0 Strain