Gene : Eucgr.B00316 E. grandis v2.0
Defline:  (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  215
Name:  ? Eucgr.B00316 Secondary Identifier:  ? PAC:32061647
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7560 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00316 0.5kb upstream 0.5kb upstream 6111 true Chr02: 3075554-3081664 Eucalyptus grandis
Eucgr.B00316 0.5kb upstream 0.5kb upstream 500 false Chr02: 3081165-3081664 Eucalyptus grandis
Eucgr.B00316 0.5kb downstream 0.5kb downstream 6111 true Chr02: 3075054-3081164 Eucalyptus grandis
Eucgr.B00316 0.5kb downstream 0.5kb downstream 500 false Chr02: 3075054-3075553 Eucalyptus grandis
Eucgr.B00316 1.0kb upstream 1.0kb upstream 6611 true Chr02: 3075554-3082164 Eucalyptus grandis
Eucgr.B00316 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3081165-3082164 Eucalyptus grandis
Eucgr.B00316 1.0kb downstream 1.0kb downstream 6611 true Chr02: 3074554-3081164 Eucalyptus grandis
Eucgr.B00316 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3074554-3075553 Eucalyptus grandis
Eucgr.B00316 2.0kb upstream 2.0kb upstream 7611 true Chr02: 3075554-3083164 Eucalyptus grandis
Eucgr.B00316 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3081165-3083164 Eucalyptus grandis
Eucgr.B00316 2.0kb downstream 2.0kb downstream 7611 true Chr02: 3073554-3081164 Eucalyptus grandis
Eucgr.B00316 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3073554-3075553 Eucalyptus grandis
Eucgr.B00316 5.0kb upstream 5.0kb upstream 10611 true Chr02: 3075554-3086164 Eucalyptus grandis
Eucgr.B00316 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3081165-3086164 Eucalyptus grandis
Eucgr.B00316 5.0kb downstream 5.0kb downstream 10611 true Chr02: 3070554-3081164 Eucalyptus grandis
Eucgr.B00316 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3070554-3075553 Eucalyptus grandis
Eucgr.B00316 10.0kb upstream 10.0kb upstream 15611 true Chr02: 3075554-3091164 Eucalyptus grandis
Eucgr.B00316 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3081165-3091164 Eucalyptus grandis
Eucgr.B00316 10.0kb downstream 10.0kb downstream 15611 true Chr02: 3065554-3081164 Eucalyptus grandis
Eucgr.B00316 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3065554-3075553 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.5222 0.0 138.826 High High
cufflinks 1.00306 0.0 2.84081    
cufflinks 46.1646 0.0 103.008 High  
cufflinks 0.728514 0.0 2.13746   Low
cufflinks 1.90471 0.0 5.07705    
cufflinks 27.3866 0.0 60.5681    

0 Strain