Gene : Eucgr.B00293 E. grandis v2.0
Defline:  (1 of 1) 2.4.2.18 - Anthranilate phosphoribosyltransferase / Phosphoribosyl-anthranilate pyrophosphorylase Genomic Order:  197
Name:  ? Eucgr.B00293 Secondary Identifier:  ? PAC:32061481
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRPSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00293 0.5kb upstream 0.5kb upstream 3802 true Chr02: 2849986-2853787 Eucalyptus grandis
Eucgr.B00293 0.5kb upstream 0.5kb upstream 500 false Chr02: 2853288-2853787 Eucalyptus grandis
Eucgr.B00293 0.5kb downstream 0.5kb downstream 3802 true Chr02: 2849486-2853287 Eucalyptus grandis
Eucgr.B00293 0.5kb downstream 0.5kb downstream 500 false Chr02: 2849486-2849985 Eucalyptus grandis
Eucgr.B00293 1.0kb upstream 1.0kb upstream 4302 true Chr02: 2849986-2854287 Eucalyptus grandis
Eucgr.B00293 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2853288-2854287 Eucalyptus grandis
Eucgr.B00293 1.0kb downstream 1.0kb downstream 4302 true Chr02: 2848986-2853287 Eucalyptus grandis
Eucgr.B00293 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2848986-2849985 Eucalyptus grandis
Eucgr.B00293 2.0kb upstream 2.0kb upstream 5302 true Chr02: 2849986-2855287 Eucalyptus grandis
Eucgr.B00293 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2853288-2855287 Eucalyptus grandis
Eucgr.B00293 2.0kb downstream 2.0kb downstream 5302 true Chr02: 2847986-2853287 Eucalyptus grandis
Eucgr.B00293 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2847986-2849985 Eucalyptus grandis
Eucgr.B00293 5.0kb upstream 5.0kb upstream 8302 true Chr02: 2849986-2858287 Eucalyptus grandis
Eucgr.B00293 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2853288-2858287 Eucalyptus grandis
Eucgr.B00293 5.0kb downstream 5.0kb downstream 8302 true Chr02: 2844986-2853287 Eucalyptus grandis
Eucgr.B00293 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2844986-2849985 Eucalyptus grandis
Eucgr.B00293 10.0kb upstream 10.0kb upstream 13302 true Chr02: 2849986-2863287 Eucalyptus grandis
Eucgr.B00293 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2853288-2863287 Eucalyptus grandis
Eucgr.B00293 10.0kb downstream 10.0kb downstream 13302 true Chr02: 2839986-2853287 Eucalyptus grandis
Eucgr.B00293 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2839986-2849985 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063634 5270 Rosid View MSA
123740526 5271 Pentapetalae View MSA
122797383 5272 Eudicot View MSA
122046938 5273 Angiosperm View MSA
121344269 5274 Embryophyte View MSA
123424710 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.5773 0.0 70.3749    
cufflinks 19.0434 0.0 43.1921   Low
cufflinks 29.9735 0.0 89.1313 High High
cufflinks 18.5734 0.0 41.9272   Low
cufflinks 26.0816 0.0 58.7026    
cufflinks 22.4585 0.0 50.4501    

0 Strain