Gene : Eucgr.B00238 E. grandis v2.0
Defline:  (1 of 2) 2.6.1.27 - Tryptophan transaminase / Tryptophan aminotransferase Genomic Order:  150
Name:  ? Eucgr.B00238 Secondary Identifier:  ? PAC:32060335
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWYDQC-4 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00238 0.5kb upstream 0.5kb upstream 6337 true Chr02: 2075490-2081826 Eucalyptus grandis
Eucgr.B00238 0.5kb upstream 0.5kb upstream 500 false Chr02: 2081327-2081826 Eucalyptus grandis
Eucgr.B00238 0.5kb downstream 0.5kb downstream 6337 true Chr02: 2074990-2081326 Eucalyptus grandis
Eucgr.B00238 0.5kb downstream 0.5kb downstream 500 false Chr02: 2074990-2075489 Eucalyptus grandis
Eucgr.B00238 1.0kb upstream 1.0kb upstream 6837 true Chr02: 2075490-2082326 Eucalyptus grandis
Eucgr.B00238 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2081327-2082326 Eucalyptus grandis
Eucgr.B00238 1.0kb downstream 1.0kb downstream 6837 true Chr02: 2074490-2081326 Eucalyptus grandis
Eucgr.B00238 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2074490-2075489 Eucalyptus grandis
Eucgr.B00238 2.0kb upstream 2.0kb upstream 7837 true Chr02: 2075490-2083326 Eucalyptus grandis
Eucgr.B00238 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2081327-2083326 Eucalyptus grandis
Eucgr.B00238 2.0kb downstream 2.0kb downstream 7837 true Chr02: 2073490-2081326 Eucalyptus grandis
Eucgr.B00238 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2073490-2075489 Eucalyptus grandis
Eucgr.B00238 5.0kb upstream 5.0kb upstream 10837 true Chr02: 2075490-2086326 Eucalyptus grandis
Eucgr.B00238 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2081327-2086326 Eucalyptus grandis
Eucgr.B00238 5.0kb downstream 5.0kb downstream 10837 true Chr02: 2070490-2081326 Eucalyptus grandis
Eucgr.B00238 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2070490-2075489 Eucalyptus grandis
Eucgr.B00238 10.0kb upstream 10.0kb upstream 15837 true Chr02: 2075490-2091326 Eucalyptus grandis
Eucgr.B00238 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2081327-2091326 Eucalyptus grandis
Eucgr.B00238 10.0kb downstream 10.0kb downstream 15837 true Chr02: 2065490-2081326 Eucalyptus grandis
Eucgr.B00238 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2065490-2075489 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065149 5270 Rosid View MSA
123746345 5271 Pentapetalae View MSA
122790946 5272 Eudicot View MSA
122048062 5273 Angiosperm View MSA
121350160 5274 Embryophyte View MSA
123381598 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.51843 0.0 4.35041    
cufflinks 0.316277 0.0 1.23014 Low Low
cufflinks 4.09006 0.0 12.2516   High
cufflinks 0.676752 0.0 2.25791    
cufflinks 2.85836 0.0 7.52335    
cufflinks 2.03912 0.0 5.73539    

0 Strain