Gene : Eucgr.B01111 E. grandis v2.0
Defline:  (1 of 1) PTHR22763:SF65 - E3 UBIQUITIN-PROTEIN LIGASE RHF1A Genomic Order:  881
Name:  ? Eucgr.B01111 Secondary Identifier:  ? PAC:32058407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01111 0.5kb upstream 0.5kb upstream 4513 true Chr02: 16846338-16850850 Eucalyptus grandis
Eucgr.B01111 0.5kb upstream 0.5kb upstream 500 false Chr02: 16846338-16846837 Eucalyptus grandis
Eucgr.B01111 0.5kb downstream 0.5kb downstream 4513 true Chr02: 16846838-16851350 Eucalyptus grandis
Eucgr.B01111 0.5kb downstream 0.5kb downstream 500 false Chr02: 16850851-16851350 Eucalyptus grandis
Eucgr.B01111 1.0kb upstream 1.0kb upstream 5013 true Chr02: 16845838-16850850 Eucalyptus grandis
Eucgr.B01111 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16845838-16846837 Eucalyptus grandis
Eucgr.B01111 1.0kb downstream 1.0kb downstream 5013 true Chr02: 16846838-16851850 Eucalyptus grandis
Eucgr.B01111 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16850851-16851850 Eucalyptus grandis
Eucgr.B01111 2.0kb upstream 2.0kb upstream 6013 true Chr02: 16844838-16850850 Eucalyptus grandis
Eucgr.B01111 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16844838-16846837 Eucalyptus grandis
Eucgr.B01111 2.0kb downstream 2.0kb downstream 6013 true Chr02: 16846838-16852850 Eucalyptus grandis
Eucgr.B01111 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16850851-16852850 Eucalyptus grandis
Eucgr.B01111 5.0kb upstream 5.0kb upstream 9013 true Chr02: 16841838-16850850 Eucalyptus grandis
Eucgr.B01111 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16841838-16846837 Eucalyptus grandis
Eucgr.B01111 5.0kb downstream 5.0kb downstream 9013 true Chr02: 16846838-16855850 Eucalyptus grandis
Eucgr.B01111 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16850851-16855850 Eucalyptus grandis
Eucgr.B01111 10.0kb upstream 10.0kb upstream 14013 true Chr02: 16836838-16850850 Eucalyptus grandis
Eucgr.B01111 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16836838-16846837 Eucalyptus grandis
Eucgr.B01111 10.0kb downstream 10.0kb downstream 14013 true Chr02: 16846838-16860850 Eucalyptus grandis
Eucgr.B01111 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16850851-16860850 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791776 5273 Angiosperm View MSA
124067987 5270 Rosid View MSA
123741405 5271 Pentapetalae View MSA
122791979 5272 Eudicot View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0949 0.0 36.069    
cufflinks 37.4115 0.0 82.8893   High
cufflinks 19.5071 0.0 43.399    
cufflinks 33.9635 0.0 75.1573   High
cufflinks 16.8997 0.0 37.7669    
cufflinks 19.2942 0.0 43.0141    

0 Strain