Gene : Eucgr.B01056 E. grandis v2.0
Defline:  (1 of 3) PTHR33044:SF23 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  834
Name:  ? Eucgr.B01056 Secondary Identifier:  ? PAC:32058689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01056 0.5kb upstream 0.5kb upstream 2359 true Chr02: 15383312-15385670 Eucalyptus grandis
Eucgr.B01056 0.5kb upstream 0.5kb upstream 500 false Chr02: 15383312-15383811 Eucalyptus grandis
Eucgr.B01056 0.5kb downstream 0.5kb downstream 2359 true Chr02: 15383812-15386170 Eucalyptus grandis
Eucgr.B01056 0.5kb downstream 0.5kb downstream 500 false Chr02: 15385671-15386170 Eucalyptus grandis
Eucgr.B01056 1.0kb upstream 1.0kb upstream 2859 true Chr02: 15382812-15385670 Eucalyptus grandis
Eucgr.B01056 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15382812-15383811 Eucalyptus grandis
Eucgr.B01056 1.0kb downstream 1.0kb downstream 2859 true Chr02: 15383812-15386670 Eucalyptus grandis
Eucgr.B01056 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15385671-15386670 Eucalyptus grandis
Eucgr.B01056 2.0kb upstream 2.0kb upstream 3859 true Chr02: 15381812-15385670 Eucalyptus grandis
Eucgr.B01056 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15381812-15383811 Eucalyptus grandis
Eucgr.B01056 2.0kb downstream 2.0kb downstream 3859 true Chr02: 15383812-15387670 Eucalyptus grandis
Eucgr.B01056 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15385671-15387670 Eucalyptus grandis
Eucgr.B01056 5.0kb upstream 5.0kb upstream 6859 true Chr02: 15378812-15385670 Eucalyptus grandis
Eucgr.B01056 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15378812-15383811 Eucalyptus grandis
Eucgr.B01056 5.0kb downstream 5.0kb downstream 6859 true Chr02: 15383812-15390670 Eucalyptus grandis
Eucgr.B01056 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15385671-15390670 Eucalyptus grandis
Eucgr.B01056 10.0kb upstream 10.0kb upstream 11859 true Chr02: 15373812-15385670 Eucalyptus grandis
Eucgr.B01056 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15373812-15383811 Eucalyptus grandis
Eucgr.B01056 10.0kb downstream 10.0kb downstream 11859 true Chr02: 15383812-15395670 Eucalyptus grandis
Eucgr.B01056 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15385671-15395670 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071841 5270 Rosid View MSA
123750457 5271 Pentapetalae View MSA
122796784 5272 Eudicot View MSA
122044405 5273 Angiosperm View MSA
121350962 5274 Embryophyte View MSA
123381949 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94939 0.0 6.06464   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.10401 0.0 9.22531    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.50025 0.0 12.7346    

0 Strain