Gene : Eucgr.B01032 E. grandis v2.0
Defline:  (1 of 100) PTHR23155//PTHR23155:SF563 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  813
Name:  ? Eucgr.B01032 Secondary Identifier:  ? PAC:32061531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01032 0.5kb upstream 0.5kb upstream 3665 true Chr02: 14357652-14361316 Eucalyptus grandis
Eucgr.B01032 0.5kb upstream 0.5kb upstream 500 false Chr02: 14360817-14361316 Eucalyptus grandis
Eucgr.B01032 0.5kb downstream 0.5kb downstream 3665 true Chr02: 14357152-14360816 Eucalyptus grandis
Eucgr.B01032 0.5kb downstream 0.5kb downstream 500 false Chr02: 14357152-14357651 Eucalyptus grandis
Eucgr.B01032 1.0kb upstream 1.0kb upstream 4165 true Chr02: 14357652-14361816 Eucalyptus grandis
Eucgr.B01032 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14360817-14361816 Eucalyptus grandis
Eucgr.B01032 1.0kb downstream 1.0kb downstream 4165 true Chr02: 14356652-14360816 Eucalyptus grandis
Eucgr.B01032 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14356652-14357651 Eucalyptus grandis
Eucgr.B01032 2.0kb upstream 2.0kb upstream 5165 true Chr02: 14357652-14362816 Eucalyptus grandis
Eucgr.B01032 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14360817-14362816 Eucalyptus grandis
Eucgr.B01032 2.0kb downstream 2.0kb downstream 5165 true Chr02: 14355652-14360816 Eucalyptus grandis
Eucgr.B01032 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14355652-14357651 Eucalyptus grandis
Eucgr.B01032 5.0kb upstream 5.0kb upstream 8165 true Chr02: 14357652-14365816 Eucalyptus grandis
Eucgr.B01032 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14360817-14365816 Eucalyptus grandis
Eucgr.B01032 5.0kb downstream 5.0kb downstream 8165 true Chr02: 14352652-14360816 Eucalyptus grandis
Eucgr.B01032 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14352652-14357651 Eucalyptus grandis
Eucgr.B01032 10.0kb upstream 10.0kb upstream 13165 true Chr02: 14357652-14370816 Eucalyptus grandis
Eucgr.B01032 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14360817-14370816 Eucalyptus grandis
Eucgr.B01032 10.0kb downstream 10.0kb downstream 13165 true Chr02: 14347652-14360816 Eucalyptus grandis
Eucgr.B01032 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14347652-14357651 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782904 5273 Angiosperm View MSA
124051611 5270 Rosid View MSA
123754067 5271 Pentapetalae View MSA
122775480 5272 Eudicot View MSA
121054404 5274 Embryophyte View MSA
123094390 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.93735 0.0 5.00567    
cufflinks 3.55718 0.0 8.53971    
cufflinks 1.2174 0.0 3.26809    
cufflinks 0.556336 0.0 1.60903    
cufflinks 0.453721 0.0 1.35276 Low  
cufflinks 0.0142584 0.0 0.103878 Low Low

0 Strain