Gene : Eucgr.B00999 E. grandis v2.0
Defline:  (1 of 1) PTHR23111//PTHR23111:SF40 - ZINC FINGER PROTEIN Genomic Order:  784
Name:  ? Eucgr.B00999 Secondary Identifier:  ? PAC:32060067
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00999 0.5kb upstream 0.5kb upstream 5727 true Chr02: 13882513-13888239 Eucalyptus grandis
Eucgr.B00999 0.5kb upstream 0.5kb upstream 500 false Chr02: 13887740-13888239 Eucalyptus grandis
Eucgr.B00999 0.5kb downstream 0.5kb downstream 5727 true Chr02: 13882013-13887739 Eucalyptus grandis
Eucgr.B00999 0.5kb downstream 0.5kb downstream 500 false Chr02: 13882013-13882512 Eucalyptus grandis
Eucgr.B00999 1.0kb upstream 1.0kb upstream 6227 true Chr02: 13882513-13888739 Eucalyptus grandis
Eucgr.B00999 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13887740-13888739 Eucalyptus grandis
Eucgr.B00999 1.0kb downstream 1.0kb downstream 6227 true Chr02: 13881513-13887739 Eucalyptus grandis
Eucgr.B00999 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13881513-13882512 Eucalyptus grandis
Eucgr.B00999 2.0kb upstream 2.0kb upstream 7227 true Chr02: 13882513-13889739 Eucalyptus grandis
Eucgr.B00999 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13887740-13889739 Eucalyptus grandis
Eucgr.B00999 2.0kb downstream 2.0kb downstream 7227 true Chr02: 13880513-13887739 Eucalyptus grandis
Eucgr.B00999 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13880513-13882512 Eucalyptus grandis
Eucgr.B00999 5.0kb upstream 5.0kb upstream 10227 true Chr02: 13882513-13892739 Eucalyptus grandis
Eucgr.B00999 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13887740-13892739 Eucalyptus grandis
Eucgr.B00999 5.0kb downstream 5.0kb downstream 10227 true Chr02: 13877513-13887739 Eucalyptus grandis
Eucgr.B00999 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13877513-13882512 Eucalyptus grandis
Eucgr.B00999 10.0kb upstream 10.0kb upstream 15227 true Chr02: 13882513-13897739 Eucalyptus grandis
Eucgr.B00999 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13887740-13897739 Eucalyptus grandis
Eucgr.B00999 10.0kb downstream 10.0kb downstream 15227 true Chr02: 13872513-13887739 Eucalyptus grandis
Eucgr.B00999 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13872513-13882512 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068006 5270 Rosid View MSA
123752037 5271 Pentapetalae View MSA
122793465 5272 Eudicot View MSA
122045549 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.39907 0.0 15.333    
cufflinks 0.787355 0.0 2.32999 Low Low
cufflinks 3.53407 0.0 8.99112    
cufflinks 1.21711 0.0 3.43697    
cufflinks 1.94007 0.0 5.23936    
cufflinks 8.81418 0.0 20.5161   High

0 Strain