Gene : Eucgr.B00877 E. grandis v2.0

Defline:  (1 of 2) PTHR11102:SF84 - HCP-like superfamily protein-related Genomic Order:  702
Name:  ? Eucgr.B00877 Secondary Identifier:  ? PAC:32060243

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00877 0.5kb upstream 0.5kb upstream 9695 true Chr02: 11346622-11356316 Eucalyptus grandis
Eucgr.B00877 0.5kb upstream 0.5kb upstream 500 false Chr02: 11355817-11356316 Eucalyptus grandis
Eucgr.B00877 0.5kb downstream 0.5kb downstream 9695 true Chr02: 11346122-11355816 Eucalyptus grandis
Eucgr.B00877 0.5kb downstream 0.5kb downstream 500 false Chr02: 11346122-11346621 Eucalyptus grandis
Eucgr.B00877 1.0kb upstream 1.0kb upstream 10195 true Chr02: 11346622-11356816 Eucalyptus grandis
Eucgr.B00877 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11355817-11356816 Eucalyptus grandis
Eucgr.B00877 1.0kb downstream 1.0kb downstream 10195 true Chr02: 11345622-11355816 Eucalyptus grandis
Eucgr.B00877 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11345622-11346621 Eucalyptus grandis
Eucgr.B00877 2.0kb upstream 2.0kb upstream 11195 true Chr02: 11346622-11357816 Eucalyptus grandis
Eucgr.B00877 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11355817-11357816 Eucalyptus grandis
Eucgr.B00877 2.0kb downstream 2.0kb downstream 11195 true Chr02: 11344622-11355816 Eucalyptus grandis
Eucgr.B00877 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11344622-11346621 Eucalyptus grandis
Eucgr.B00877 5.0kb upstream 5.0kb upstream 14195 true Chr02: 11346622-11360816 Eucalyptus grandis
Eucgr.B00877 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11355817-11360816 Eucalyptus grandis
Eucgr.B00877 5.0kb downstream 5.0kb downstream 14195 true Chr02: 11341622-11355816 Eucalyptus grandis
Eucgr.B00877 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11341622-11346621 Eucalyptus grandis
Eucgr.B00877 10.0kb upstream 10.0kb upstream 19195 true Chr02: 11346622-11365816 Eucalyptus grandis
Eucgr.B00877 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11355817-11365816 Eucalyptus grandis
Eucgr.B00877 10.0kb downstream 10.0kb downstream 19195 true Chr02: 11336622-11355816 Eucalyptus grandis
Eucgr.B00877 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11336622-11346621 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.02659 0.0 16.3528    
cufflinks 0.977166 0.0 2.76004   Low
cufflinks 5.26189 0.0 12.5432    
cufflinks 2.42246 0.0 6.21496    
cufflinks 1.5895 0.0 4.27366    
cufflinks 7.842 0.0 18.0808   High

0 Strain