Gene : Eucgr.B00823 E. grandis v2.0
Defline:  (1 of 6) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  634
Name:  ? Eucgr.B00823 Secondary Identifier:  ? PAC:32058425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00823 0.5kb upstream 0.5kb upstream 6430 true Chr02: 8524383-8530812 Eucalyptus grandis
Eucgr.B00823 0.5kb upstream 0.5kb upstream 500 false Chr02: 8524383-8524882 Eucalyptus grandis
Eucgr.B00823 0.5kb downstream 0.5kb downstream 6430 true Chr02: 8524883-8531312 Eucalyptus grandis
Eucgr.B00823 0.5kb downstream 0.5kb downstream 500 false Chr02: 8530813-8531312 Eucalyptus grandis
Eucgr.B00823 1.0kb upstream 1.0kb upstream 6930 true Chr02: 8523883-8530812 Eucalyptus grandis
Eucgr.B00823 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8523883-8524882 Eucalyptus grandis
Eucgr.B00823 1.0kb downstream 1.0kb downstream 6930 true Chr02: 8524883-8531812 Eucalyptus grandis
Eucgr.B00823 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8530813-8531812 Eucalyptus grandis
Eucgr.B00823 2.0kb upstream 2.0kb upstream 7930 true Chr02: 8522883-8530812 Eucalyptus grandis
Eucgr.B00823 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8522883-8524882 Eucalyptus grandis
Eucgr.B00823 2.0kb downstream 2.0kb downstream 7930 true Chr02: 8524883-8532812 Eucalyptus grandis
Eucgr.B00823 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8530813-8532812 Eucalyptus grandis
Eucgr.B00823 5.0kb upstream 5.0kb upstream 10930 true Chr02: 8519883-8530812 Eucalyptus grandis
Eucgr.B00823 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8519883-8524882 Eucalyptus grandis
Eucgr.B00823 5.0kb downstream 5.0kb downstream 10930 true Chr02: 8524883-8535812 Eucalyptus grandis
Eucgr.B00823 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8530813-8535812 Eucalyptus grandis
Eucgr.B00823 10.0kb upstream 10.0kb upstream 15930 true Chr02: 8514883-8530812 Eucalyptus grandis
Eucgr.B00823 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8514883-8524882 Eucalyptus grandis
Eucgr.B00823 10.0kb downstream 10.0kb downstream 15930 true Chr02: 8524883-8540812 Eucalyptus grandis
Eucgr.B00823 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8530813-8540812 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071445 5270 Rosid View MSA
123749810 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.79141 0.0 17.1621    
cufflinks 3.80498 0.0 10.1922    
cufflinks 5.10517 0.0 13.5292    
cufflinks 1.95679 0.0 6.30479   Low
cufflinks 1.92323 0.0 5.06214   Low
cufflinks 7.99139 0.0 18.6677   High

0 Strain