Gene : Eucgr.B00700 E. grandis v2.0
Defline:  (1 of 1) PTHR11361:SF35 - DNA MISMATCH REPAIR PROTEIN MSH2 Genomic Order:  555
Name:  ? Eucgr.B00700 Secondary Identifier:  ? PAC:32059061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00700 0.5kb upstream 0.5kb upstream 8766 true Chr02: 7277020-7285785 Eucalyptus grandis
Eucgr.B00700 0.5kb upstream 0.5kb upstream 500 false Chr02: 7277020-7277519 Eucalyptus grandis
Eucgr.B00700 0.5kb downstream 0.5kb downstream 8766 true Chr02: 7277520-7286285 Eucalyptus grandis
Eucgr.B00700 0.5kb downstream 0.5kb downstream 500 false Chr02: 7285786-7286285 Eucalyptus grandis
Eucgr.B00700 1.0kb upstream 1.0kb upstream 9266 true Chr02: 7276520-7285785 Eucalyptus grandis
Eucgr.B00700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7276520-7277519 Eucalyptus grandis
Eucgr.B00700 1.0kb downstream 1.0kb downstream 9266 true Chr02: 7277520-7286785 Eucalyptus grandis
Eucgr.B00700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7285786-7286785 Eucalyptus grandis
Eucgr.B00700 2.0kb upstream 2.0kb upstream 10266 true Chr02: 7275520-7285785 Eucalyptus grandis
Eucgr.B00700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7275520-7277519 Eucalyptus grandis
Eucgr.B00700 2.0kb downstream 2.0kb downstream 10266 true Chr02: 7277520-7287785 Eucalyptus grandis
Eucgr.B00700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7285786-7287785 Eucalyptus grandis
Eucgr.B00700 5.0kb upstream 5.0kb upstream 13266 true Chr02: 7272520-7285785 Eucalyptus grandis
Eucgr.B00700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7272520-7277519 Eucalyptus grandis
Eucgr.B00700 5.0kb downstream 5.0kb downstream 13266 true Chr02: 7277520-7290785 Eucalyptus grandis
Eucgr.B00700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7285786-7290785 Eucalyptus grandis
Eucgr.B00700 10.0kb upstream 10.0kb upstream 18266 true Chr02: 7267520-7285785 Eucalyptus grandis
Eucgr.B00700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7267520-7277519 Eucalyptus grandis
Eucgr.B00700 10.0kb downstream 10.0kb downstream 18266 true Chr02: 7277520-7295785 Eucalyptus grandis
Eucgr.B00700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7285786-7295785 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060647 5270 Rosid View MSA
123740546 5271 Pentapetalae View MSA
122786206 5272 Eudicot View MSA
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.09625 0.0 11.6705    
cufflinks 1.51659 0.0 3.85058   Low
cufflinks 4.3092 0.0 9.93999    
cufflinks 2.52192 0.0 6.06477    
cufflinks 8.49686 0.0 18.9229   High
cufflinks 1.40907 0.0 3.66557   Low

0 Strain