Gene : Eucgr.B01554 E. grandis v2.0
Defline:  (1 of 49) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  1117
Name:  ? Eucgr.B01554 Secondary Identifier:  ? PAC:32060943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01554 0.5kb upstream 0.5kb upstream 1034 true Chr02: 22904291-22905324 Eucalyptus grandis
Eucgr.B01554 0.5kb upstream 0.5kb upstream 500 false Chr02: 22904825-22905324 Eucalyptus grandis
Eucgr.B01554 0.5kb downstream 0.5kb downstream 1034 true Chr02: 22903791-22904824 Eucalyptus grandis
Eucgr.B01554 0.5kb downstream 0.5kb downstream 500 false Chr02: 22903791-22904290 Eucalyptus grandis
Eucgr.B01554 1.0kb upstream 1.0kb upstream 1534 true Chr02: 22904291-22905824 Eucalyptus grandis
Eucgr.B01554 1.0kb upstream 1.0kb upstream 1000 false Chr02: 22904825-22905824 Eucalyptus grandis
Eucgr.B01554 1.0kb downstream 1.0kb downstream 1534 true Chr02: 22903291-22904824 Eucalyptus grandis
Eucgr.B01554 1.0kb downstream 1.0kb downstream 1000 false Chr02: 22903291-22904290 Eucalyptus grandis
Eucgr.B01554 2.0kb upstream 2.0kb upstream 2534 true Chr02: 22904291-22906824 Eucalyptus grandis
Eucgr.B01554 2.0kb upstream 2.0kb upstream 2000 false Chr02: 22904825-22906824 Eucalyptus grandis
Eucgr.B01554 2.0kb downstream 2.0kb downstream 2534 true Chr02: 22902291-22904824 Eucalyptus grandis
Eucgr.B01554 2.0kb downstream 2.0kb downstream 2000 false Chr02: 22902291-22904290 Eucalyptus grandis
Eucgr.B01554 5.0kb upstream 5.0kb upstream 5534 true Chr02: 22904291-22909824 Eucalyptus grandis
Eucgr.B01554 5.0kb upstream 5.0kb upstream 5000 false Chr02: 22904825-22909824 Eucalyptus grandis
Eucgr.B01554 5.0kb downstream 5.0kb downstream 5534 true Chr02: 22899291-22904824 Eucalyptus grandis
Eucgr.B01554 5.0kb downstream 5.0kb downstream 5000 false Chr02: 22899291-22904290 Eucalyptus grandis
Eucgr.B01554 10.0kb upstream 10.0kb upstream 10534 true Chr02: 22904291-22914824 Eucalyptus grandis
Eucgr.B01554 10.0kb upstream 10.0kb upstream 10000 false Chr02: 22904825-22914824 Eucalyptus grandis
Eucgr.B01554 10.0kb downstream 10.0kb downstream 10534 true Chr02: 22894291-22904824 Eucalyptus grandis
Eucgr.B01554 10.0kb downstream 10.0kb downstream 10000 false Chr02: 22894291-22904290 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070799 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87586 0.0 6.05461    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.32156 0.0 7.36245    
cufflinks 0.656291 0.0 2.47273   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain