Gene : Eucgr.B01359 E. grandis v2.0
Defline:  (1 of 2) PTHR24015:SF562 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  1279
Name:  ? Eucgr.B01359 Secondary Identifier:  ? PAC:32059628
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01359 0.5kb upstream 0.5kb upstream 1944 true Chr02: 26210842-26212785 Eucalyptus grandis
Eucgr.B01359 0.5kb upstream 0.5kb upstream 500 false Chr02: 26210842-26211341 Eucalyptus grandis
Eucgr.B01359 0.5kb downstream 0.5kb downstream 1944 true Chr02: 26211342-26213285 Eucalyptus grandis
Eucgr.B01359 0.5kb downstream 0.5kb downstream 500 false Chr02: 26212786-26213285 Eucalyptus grandis
Eucgr.B01359 1.0kb upstream 1.0kb upstream 2444 true Chr02: 26210342-26212785 Eucalyptus grandis
Eucgr.B01359 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26210342-26211341 Eucalyptus grandis
Eucgr.B01359 1.0kb downstream 1.0kb downstream 2444 true Chr02: 26211342-26213785 Eucalyptus grandis
Eucgr.B01359 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26212786-26213785 Eucalyptus grandis
Eucgr.B01359 2.0kb upstream 2.0kb upstream 3444 true Chr02: 26209342-26212785 Eucalyptus grandis
Eucgr.B01359 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26209342-26211341 Eucalyptus grandis
Eucgr.B01359 2.0kb downstream 2.0kb downstream 3444 true Chr02: 26211342-26214785 Eucalyptus grandis
Eucgr.B01359 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26212786-26214785 Eucalyptus grandis
Eucgr.B01359 5.0kb upstream 5.0kb upstream 6444 true Chr02: 26206342-26212785 Eucalyptus grandis
Eucgr.B01359 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26206342-26211341 Eucalyptus grandis
Eucgr.B01359 5.0kb downstream 5.0kb downstream 6444 true Chr02: 26211342-26217785 Eucalyptus grandis
Eucgr.B01359 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26212786-26217785 Eucalyptus grandis
Eucgr.B01359 10.0kb upstream 10.0kb upstream 11444 true Chr02: 26201342-26212785 Eucalyptus grandis
Eucgr.B01359 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26201342-26211341 Eucalyptus grandis
Eucgr.B01359 10.0kb downstream 10.0kb downstream 11444 true Chr02: 26211342-26222785 Eucalyptus grandis
Eucgr.B01359 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26212786-26222785 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062138 5270 Rosid View MSA
123738772 5271 Pentapetalae View MSA
122795104 5272 Eudicot View MSA
122042665 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121309997 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97316 0.0 8.19187    
cufflinks 4.94889 0.0 13.0768    
cufflinks 1.66368 0.0 4.94455   Low
cufflinks 4.43456 0.0 11.9426    
cufflinks 8.8795 0.0 22.0939   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain