Gene : Eucgr.B01293 E. grandis v2.0
Defline:  (1 of 6) PTHR11064:SF42 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 Genomic Order:  1030
Name:  ? Eucgr.B01293 Secondary Identifier:  ? PAC:32058057
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01293 0.5kb upstream 0.5kb upstream 863 true Chr02: 20499627-20500489 Eucalyptus grandis
Eucgr.B01293 0.5kb upstream 0.5kb upstream 500 false Chr02: 20499990-20500489 Eucalyptus grandis
Eucgr.B01293 0.5kb downstream 0.5kb downstream 863 true Chr02: 20499127-20499989 Eucalyptus grandis
Eucgr.B01293 0.5kb downstream 0.5kb downstream 500 false Chr02: 20499127-20499626 Eucalyptus grandis
Eucgr.B01293 1.0kb upstream 1.0kb upstream 1363 true Chr02: 20499627-20500989 Eucalyptus grandis
Eucgr.B01293 1.0kb upstream 1.0kb upstream 1000 false Chr02: 20499990-20500989 Eucalyptus grandis
Eucgr.B01293 1.0kb downstream 1.0kb downstream 1363 true Chr02: 20498627-20499989 Eucalyptus grandis
Eucgr.B01293 1.0kb downstream 1.0kb downstream 1000 false Chr02: 20498627-20499626 Eucalyptus grandis
Eucgr.B01293 2.0kb upstream 2.0kb upstream 2363 true Chr02: 20499627-20501989 Eucalyptus grandis
Eucgr.B01293 2.0kb upstream 2.0kb upstream 2000 false Chr02: 20499990-20501989 Eucalyptus grandis
Eucgr.B01293 2.0kb downstream 2.0kb downstream 2363 true Chr02: 20497627-20499989 Eucalyptus grandis
Eucgr.B01293 2.0kb downstream 2.0kb downstream 2000 false Chr02: 20497627-20499626 Eucalyptus grandis
Eucgr.B01293 5.0kb upstream 5.0kb upstream 5363 true Chr02: 20499627-20504989 Eucalyptus grandis
Eucgr.B01293 5.0kb upstream 5.0kb upstream 5000 false Chr02: 20499990-20504989 Eucalyptus grandis
Eucgr.B01293 5.0kb downstream 5.0kb downstream 5363 true Chr02: 20494627-20499989 Eucalyptus grandis
Eucgr.B01293 5.0kb downstream 5.0kb downstream 5000 false Chr02: 20494627-20499626 Eucalyptus grandis
Eucgr.B01293 10.0kb upstream 10.0kb upstream 10363 true Chr02: 20499627-20509989 Eucalyptus grandis
Eucgr.B01293 10.0kb upstream 10.0kb upstream 10000 false Chr02: 20499990-20509989 Eucalyptus grandis
Eucgr.B01293 10.0kb downstream 10.0kb downstream 10363 true Chr02: 20489627-20499989 Eucalyptus grandis
Eucgr.B01293 10.0kb downstream 10.0kb downstream 10000 false Chr02: 20489627-20499626 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
124070521 5270 Rosid View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.03958 0.0 6.94877   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.546139 0.0 2.47311    
cufflinks 1.03935 0.0 3.91601    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain