Gene : Eucgr.B01257 E. grandis v2.0
Defline:  (1 of 7) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  995
Name:  ? Eucgr.B01257 Secondary Identifier:  ? PAC:32058095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01257 0.5kb upstream 0.5kb upstream 1926 true Chr02: 19788061-19789986 Eucalyptus grandis
Eucgr.B01257 0.5kb upstream 0.5kb upstream 500 false Chr02: 19788061-19788560 Eucalyptus grandis
Eucgr.B01257 0.5kb downstream 0.5kb downstream 1926 true Chr02: 19788561-19790486 Eucalyptus grandis
Eucgr.B01257 0.5kb downstream 0.5kb downstream 500 false Chr02: 19789987-19790486 Eucalyptus grandis
Eucgr.B01257 1.0kb upstream 1.0kb upstream 2426 true Chr02: 19787561-19789986 Eucalyptus grandis
Eucgr.B01257 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19787561-19788560 Eucalyptus grandis
Eucgr.B01257 1.0kb downstream 1.0kb downstream 2426 true Chr02: 19788561-19790986 Eucalyptus grandis
Eucgr.B01257 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19789987-19790986 Eucalyptus grandis
Eucgr.B01257 2.0kb upstream 2.0kb upstream 3426 true Chr02: 19786561-19789986 Eucalyptus grandis
Eucgr.B01257 2.0kb upstream 2.0kb upstream 2000 false Chr02: 19786561-19788560 Eucalyptus grandis
Eucgr.B01257 2.0kb downstream 2.0kb downstream 3426 true Chr02: 19788561-19791986 Eucalyptus grandis
Eucgr.B01257 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19789987-19791986 Eucalyptus grandis
Eucgr.B01257 5.0kb upstream 5.0kb upstream 6426 true Chr02: 19783561-19789986 Eucalyptus grandis
Eucgr.B01257 5.0kb upstream 5.0kb upstream 5000 false Chr02: 19783561-19788560 Eucalyptus grandis
Eucgr.B01257 5.0kb downstream 5.0kb downstream 6426 true Chr02: 19788561-19794986 Eucalyptus grandis
Eucgr.B01257 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19789987-19794986 Eucalyptus grandis
Eucgr.B01257 10.0kb upstream 10.0kb upstream 11426 true Chr02: 19778561-19789986 Eucalyptus grandis
Eucgr.B01257 10.0kb upstream 10.0kb upstream 10000 false Chr02: 19778561-19788560 Eucalyptus grandis
Eucgr.B01257 10.0kb downstream 10.0kb downstream 11426 true Chr02: 19788561-19799986 Eucalyptus grandis
Eucgr.B01257 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19789987-19799986 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.27931 0.0 0.945032 Low Low
cufflinks 0.438215 0.0 1.39017 Low  
cufflinks 0.340242 0.0 1.11431 Low  
cufflinks 1.25254 0.0 3.50914   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.943877 0.0 2.76652    

0 Strain