Gene : Eucgr.B01229 E. grandis v2.0
Defline:  (1 of 2) PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR Genomic Order:  975
Name:  ? Eucgr.B01229 Secondary Identifier:  ? PAC:32059861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01229 0.5kb upstream 0.5kb upstream 6333 true Chr02: 19422184-19428516 Eucalyptus grandis
Eucgr.B01229 0.5kb upstream 0.5kb upstream 500 false Chr02: 19422184-19422683 Eucalyptus grandis
Eucgr.B01229 0.5kb downstream 0.5kb downstream 6333 true Chr02: 19422684-19429016 Eucalyptus grandis
Eucgr.B01229 0.5kb downstream 0.5kb downstream 500 false Chr02: 19428517-19429016 Eucalyptus grandis
Eucgr.B01229 1.0kb upstream 1.0kb upstream 6833 true Chr02: 19421684-19428516 Eucalyptus grandis
Eucgr.B01229 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19421684-19422683 Eucalyptus grandis
Eucgr.B01229 1.0kb downstream 1.0kb downstream 6833 true Chr02: 19422684-19429516 Eucalyptus grandis
Eucgr.B01229 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19428517-19429516 Eucalyptus grandis
Eucgr.B01229 2.0kb upstream 2.0kb upstream 7833 true Chr02: 19420684-19428516 Eucalyptus grandis
Eucgr.B01229 2.0kb upstream 2.0kb upstream 2000 false Chr02: 19420684-19422683 Eucalyptus grandis
Eucgr.B01229 2.0kb downstream 2.0kb downstream 7833 true Chr02: 19422684-19430516 Eucalyptus grandis
Eucgr.B01229 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19428517-19430516 Eucalyptus grandis
Eucgr.B01229 5.0kb upstream 5.0kb upstream 10833 true Chr02: 19417684-19428516 Eucalyptus grandis
Eucgr.B01229 5.0kb upstream 5.0kb upstream 5000 false Chr02: 19417684-19422683 Eucalyptus grandis
Eucgr.B01229 5.0kb downstream 5.0kb downstream 10833 true Chr02: 19422684-19433516 Eucalyptus grandis
Eucgr.B01229 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19428517-19433516 Eucalyptus grandis
Eucgr.B01229 10.0kb upstream 10.0kb upstream 15833 true Chr02: 19412684-19428516 Eucalyptus grandis
Eucgr.B01229 10.0kb upstream 10.0kb upstream 10000 false Chr02: 19412684-19422683 Eucalyptus grandis
Eucgr.B01229 10.0kb downstream 10.0kb downstream 15833 true Chr02: 19422684-19438516 Eucalyptus grandis
Eucgr.B01229 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19428517-19438516 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065681 5270 Rosid View MSA
123745192 5271 Pentapetalae View MSA
122795614 5272 Eudicot View MSA
122047490 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349478 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7218 0.0 67.5351    
cufflinks 32.5748 0.0 85.2384    
cufflinks 24.9776 0.0 70.7777    
cufflinks 35.9822 0.0 90.2843   High
cufflinks 22.751 0.0 62.1723    
cufflinks 17.6283 0.0 49.0992   Low

0 Strain