Gene : Eucgr.B01694 E. grandis v2.0
Defline:  (1 of 2) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase Genomic Order:  1633
Name:  ? Eucgr.B01694 Secondary Identifier:  ? PAC:32060417
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01694 0.5kb upstream 0.5kb upstream 12487 true Chr02: 39458827-39471313 Eucalyptus grandis
Eucgr.B01694 0.5kb upstream 0.5kb upstream 500 false Chr02: 39458827-39459326 Eucalyptus grandis
Eucgr.B01694 0.5kb downstream 0.5kb downstream 12487 true Chr02: 39459327-39471813 Eucalyptus grandis
Eucgr.B01694 0.5kb downstream 0.5kb downstream 500 false Chr02: 39471314-39471813 Eucalyptus grandis
Eucgr.B01694 1.0kb upstream 1.0kb upstream 12987 true Chr02: 39458327-39471313 Eucalyptus grandis
Eucgr.B01694 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39458327-39459326 Eucalyptus grandis
Eucgr.B01694 1.0kb downstream 1.0kb downstream 12987 true Chr02: 39459327-39472313 Eucalyptus grandis
Eucgr.B01694 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39471314-39472313 Eucalyptus grandis
Eucgr.B01694 2.0kb upstream 2.0kb upstream 13987 true Chr02: 39457327-39471313 Eucalyptus grandis
Eucgr.B01694 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39457327-39459326 Eucalyptus grandis
Eucgr.B01694 2.0kb downstream 2.0kb downstream 13987 true Chr02: 39459327-39473313 Eucalyptus grandis
Eucgr.B01694 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39471314-39473313 Eucalyptus grandis
Eucgr.B01694 5.0kb upstream 5.0kb upstream 16987 true Chr02: 39454327-39471313 Eucalyptus grandis
Eucgr.B01694 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39454327-39459326 Eucalyptus grandis
Eucgr.B01694 5.0kb downstream 5.0kb downstream 16987 true Chr02: 39459327-39476313 Eucalyptus grandis
Eucgr.B01694 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39471314-39476313 Eucalyptus grandis
Eucgr.B01694 10.0kb upstream 10.0kb upstream 21987 true Chr02: 39449327-39471313 Eucalyptus grandis
Eucgr.B01694 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39449327-39459326 Eucalyptus grandis
Eucgr.B01694 10.0kb downstream 10.0kb downstream 21987 true Chr02: 39459327-39481313 Eucalyptus grandis
Eucgr.B01694 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39471314-39481313 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041433 5273 Angiosperm View MSA
124065377 5270 Rosid View MSA
123738255 5271 Pentapetalae View MSA
122787643 5272 Eudicot View MSA
121347450 5274 Embryophyte View MSA
123427840 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.14732 0.0 9.62772    
cufflinks 3.54969 0.0 8.30387    
cufflinks 3.16995 0.0 7.49558    
cufflinks 2.69676 0.0 6.43968   Low
cufflinks 3.61149 0.0 8.44491    
cufflinks 4.73443 0.0 10.9279   High

0 Strain